Project name: 19293a10be77a5b [mutate: LV39B]

Status: done

Started: 2026-03-10 17:54:04
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Chain sequence(s) C: DARRKAEMLQNEAKTLLAQANSKLQLLKDLERKYEDNQRYLEDKAQELARLEGEVRSLLKDISQKVAVYSTCL
B: ENVERWQGQYEGLRGQDLGQAVLDAGHSVSTLEKTLPQLLAKLSILENRGVHNASLALSASIGRVRELCAQARGAASKVKV
D: DTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIEEIMKCIRNLEDIRKTLPSGCFNTPSIEKP
input PDB
Selected Chain(s) B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues LV39B
Energy difference between WT (input) and mutated protein (by FoldX) 2.06979 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:04:03)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:04:26)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:49)
Show buried residues

Minimal score value
-4.2138
Maximal score value
1.7673
Average score
-1.4746
Total score value
-348.0122

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E B -2.8729
2 N B -2.3170
3 V B -0.8212
4 E B -2.9636
5 R B -3.2710
6 W B -1.2774
7 Q B -1.8822
8 G B -2.4965
9 Q B -2.0969
10 Y B -1.6877
11 E B -2.8716
12 G B -2.0316
13 L B -1.1753
14 R B -2.9584
15 G B -2.9609
16 Q B -2.5327
17 D B -2.6017
18 L B -2.5274
19 G B -1.6238
20 Q B -1.5701
21 A B 0.0000
22 V B 0.0000
23 L B 0.0449
24 D B -1.0131
25 A B 0.0000
26 G B -1.0339
27 H B -1.2936
28 S B -1.3869
29 V B 0.0000
30 S B -1.5293
31 T B -1.7239
32 L B 0.0000
33 E B -3.1302
34 K B -2.8567
35 T B -1.8815
36 L B 0.0000
37 P B -1.5577
38 Q B -1.5689
39 V B 0.0000 mutated: LV39B
40 L B -0.1176
41 A B -0.0307
42 K B -0.4013
43 L B 0.0000
44 S B -0.3287
45 I B 0.5999
46 L B 0.0000
47 E B -1.9863
48 N B -1.5119
49 R B -0.8965
50 G B -0.4763
51 V B 0.8614
52 H B 0.0558
53 N B -0.5657
54 A B 0.0000
55 S B 0.4183
56 L B 1.2985
57 A B 0.3353
58 L B 0.0000
59 S B -0.0528
60 A B -0.0386
61 S B -0.6998
62 I B 0.0000
63 G B -1.8939
64 R B -2.3732
65 V B 0.0000
66 R B -2.8554
67 E B -3.2121
68 L B 0.0000
69 C B 0.0000
70 A B -1.8769
71 Q B -2.0018
72 A B 0.0000
73 R B -2.1813
74 G B -1.5453
75 A B -1.6758
76 A B 0.0000
77 S B -1.6041
78 K B -2.2199
79 V B 0.0000
80 K B -1.2967
81 V B 0.6477
1 D C -2.6049
2 A C -2.3727
3 R C -3.1990
4 R C -3.2862
5 K C -2.4815
6 A C 0.0000
7 E C -2.8277
8 M C -1.8972
9 L C 0.0000
10 Q C -2.2023
11 N C -2.3968
12 E C -2.2341
13 A C 0.0000
14 K C -2.2941
15 T C -1.5637
16 L C -1.2075
17 L C -1.5424
18 A C -1.1542
19 Q C -1.5435
20 A C 0.0000
21 N C -1.6864
22 S C -1.5134
23 K C -1.7680
24 L C 0.0000
25 Q C -2.1625
26 L C -1.3915
27 L C 0.0000
28 K C -2.4180
29 D C -2.5840
30 L C 0.0000
31 E C -2.6307
32 R C -3.8269
33 K C -3.5252
34 Y C -2.9106
35 E C -3.5724
36 D C -3.6857
37 N C 0.0000
38 Q C -2.4918
39 R C -3.1153
40 Y C -1.9319
41 L C 0.0000
42 E C -2.6743
43 D C -3.0325
44 K C -2.3180
45 A C -1.8902
46 Q C -2.7893
47 E C -2.6106
48 L C 0.0000
49 A C -1.9975
50 R C -2.8133
51 L C 0.0000
52 E C 0.0000
53 G C -2.0829
54 E C -2.4300
55 V C 0.0000
56 R C -2.3969
57 S C -2.0321
58 L C 0.0000
59 L C -2.3720
60 K C -2.9994
61 D C -2.7024
62 I C 0.0000
63 S C -2.0910
64 Q C -2.0022
65 K C -1.5164
66 V C 0.0000
67 A C -0.4019
68 V C 0.9001
69 Y C 0.6689
70 S C 0.3101
71 T C 0.8508
72 C C 1.4475
73 L C 1.7673
1 D D -1.5146
2 T D -0.4642
3 V D 0.4928
4 D D -0.9958
5 L D -1.3370
6 N D -2.1925
7 K D -2.0887
8 L D 0.0000
9 N D -2.9995
10 E D -3.3079
11 I D 0.0000
12 E D -2.4274
13 G D -2.0990
14 T D -2.2118
15 L D 0.0000
16 N D -2.6725
17 K D -3.5665
18 A D 0.0000
19 K D -2.8525
20 D D -3.4694
21 E D -2.9368
22 M D 0.0000
23 K D -2.9891
24 V D -0.5860
25 S D -1.6857
26 D D -3.1202
27 L D 0.0000
28 D D -3.9920
29 R D -4.1856
30 K D -3.7353
31 V D 0.0000
32 S D -3.1456
33 D D -4.2138
34 L D 0.0000
35 E D -3.7097
36 N D -3.9110
37 E D -3.9132
38 A D 0.0000
39 K D -4.0895
40 K D -3.6665
41 Q D -2.7752
42 E D -2.4408
43 A D -1.8187
44 A D -1.6320
45 I D 0.0000
46 M D -1.2265
47 D D -2.6177
48 Y D -2.0274
49 N D -2.4036
50 R D -3.6538
51 D D -3.2578
52 I D 0.0000
53 E D -3.8024
54 E D -3.5965
55 I D 0.0000
56 M D -2.1641
57 K D -2.9348
58 C D -2.3620
59 I D 0.0000
60 R D -2.8090
61 N D -2.6279
62 L D 0.0000
63 E D -2.8261
64 D D -3.2017
65 I D -2.0056
66 R D -2.6146
67 K D -2.7058
68 T D -1.2412
69 L D 0.0000
70 P D 0.0518
71 S D -0.2009
72 G D 0.3134
73 C D 1.4347
74 F D 1.7618
75 N D 0.1275
76 T D 0.3351
77 P D 0.1095
78 S D -0.3981
79 I D 0.3595
80 E D -1.8240
81 K D -2.1228
82 P D -1.3013
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Laboratory of Theory of Biopolymers 2018