| Chain sequence(s) |
A: MNDPNSCVDNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDSGSIVIPYDNIGTSLVSLVVPVSIGMFVNHKWPQKAKIILKIGSIAGAILIVLIAVVGGILYQSAWIIAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRTVAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAYKKCHGKNKAEIPESKENGTEPESSFYKANGGFQPDEK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:02)
[INFO] Main: Simulation completed successfully. (00:03:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.0427 | |
| 2 | N | A | -1.8648 | |
| 3 | D | A | -2.6005 | |
| 4 | P | A | -1.9568 | |
| 5 | N | A | -2.0441 | |
| 6 | S | A | -1.2079 | |
| 7 | C | A | 0.4762 | |
| 8 | V | A | 1.0257 | |
| 9 | D | A | -1.3006 | |
| 10 | N | A | -0.6499 | |
| 11 | A | A | 1.3895 | |
| 12 | T | A | 1.3931 | |
| 13 | V | A | 2.7341 | |
| 14 | C | A | 2.0255 | |
| 15 | S | A | 0.4092 | |
| 16 | G | A | -0.5482 | |
| 17 | A | A | -0.5021 | |
| 18 | S | A | 0.6972 | |
| 19 | C | A | 2.1314 | |
| 20 | V | A | 3.1569 | |
| 21 | V | A | 2.2371 | |
| 22 | P | A | -0.0155 | |
| 23 | E | A | -1.7030 | |
| 24 | S | A | -0.9980 | |
| 25 | N | A | -0.9410 | |
| 26 | F | A | 1.0871 | |
| 27 | N | A | 0.1105 | |
| 28 | N | A | -0.0145 | |
| 29 | I | A | 2.5652 | |
| 30 | L | A | 2.2470 | |
| 31 | S | A | 1.9441 | |
| 32 | V | A | 2.9307 | |
| 33 | V | A | 3.2020 | |
| 34 | L | A | 2.2515 | |
| 35 | S | A | 1.7887 | |
| 36 | T | A | 2.0039 | |
| 37 | V | A | 2.3192 | |
| 38 | L | A | 1.7502 | |
| 39 | T | A | 1.6761 | |
| 40 | I | A | 2.5699 | |
| 41 | L | A | 1.9546 | |
| 42 | L | A | 1.2824 | |
| 43 | A | A | 1.4792 | |
| 44 | L | A | 1.4640 | |
| 45 | V | A | 0.0000 | |
| 46 | M | A | 0.0000 | |
| 47 | F | A | 1.2607 | |
| 48 | S | A | 0.0000 | |
| 49 | M | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | C | A | 0.0000 | |
| 52 | N | A | -0.5091 | |
| 53 | V | A | 0.0000 | |
| 54 | E | A | -0.7988 | |
| 55 | I | A | 0.0276 | |
| 56 | K | A | -1.5383 | |
| 57 | K | A | -1.0426 | |
| 58 | F | A | -0.1096 | |
| 59 | L | A | 0.0601 | |
| 60 | G | A | -1.0675 | |
| 61 | H | A | -1.0350 | |
| 62 | I | A | 0.0609 | |
| 63 | K | A | -1.8809 | |
| 64 | R | A | -2.0038 | |
| 65 | P | A | -0.5589 | |
| 66 | W | A | 0.6232 | |
| 67 | G | A | 0.0000 | |
| 68 | I | A | 0.8773 | |
| 69 | C | A | 1.1708 | |
| 70 | V | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | F | A | 1.4479 | |
| 73 | L | A | 1.3876 | |
| 74 | C | A | 0.0000 | |
| 75 | Q | A | 0.0000 | |
| 76 | F | A | 0.0000 | |
| 77 | G | A | 0.6714 | |
| 78 | I | A | 1.0084 | |
| 79 | M | A | 0.0000 | |
| 80 | P | A | 0.0000 | |
| 81 | L | A | 1.6804 | |
| 82 | T | A | 1.5196 | |
| 83 | G | A | 0.0000 | |
| 84 | F | A | 1.9041 | |
| 85 | I | A | 2.4444 | |
| 86 | L | A | 0.0000 | |
| 87 | S | A | 0.0000 | |
| 88 | V | A | 1.3949 | |
| 89 | A | A | 0.8021 | |
| 90 | F | A | 0.3757 | |
| 91 | D | A | -0.8371 | |
| 92 | I | A | 0.0000 | |
| 93 | L | A | 1.0333 | |
| 94 | P | A | 0.7613 | |
| 95 | L | A | 0.0000 | |
| 96 | Q | A | 0.2192 | |
| 97 | A | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | V | A | 0.0000 | |
| 100 | V | A | 0.0000 | |
| 101 | L | A | 0.0000 | |
| 102 | I | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | G | A | 0.0000 | |
| 105 | C | A | 0.0000 | |
| 106 | C | A | 0.0000 | |
| 107 | P | A | 0.0000 | |
| 108 | G | A | 0.0000 | |
| 109 | G | A | 0.0000 | |
| 110 | T | A | 0.2375 | |
| 111 | A | A | 0.6109 | |
| 112 | S | A | 0.0000 | |
| 113 | N | A | 0.0000 | |
| 114 | I | A | 2.1241 | |
| 115 | L | A | 0.0000 | |
| 116 | A | A | 0.0000 | |
| 117 | Y | A | 1.8905 | |
| 118 | W | A | 1.8998 | |
| 119 | V | A | 0.0000 | |
| 120 | D | A | -0.3070 | |
| 121 | G | A | 0.0197 | |
| 122 | D | A | -0.3614 | |
| 123 | M | A | 0.1011 | |
| 124 | D | A | -1.0541 | |
| 125 | L | A | 0.0000 | |
| 126 | S | A | 0.0000 | |
| 127 | V | A | -0.1294 | |
| 128 | S | A | 0.0000 | |
| 129 | M | A | 0.0000 | |
| 130 | T | A | 0.0000 | |
| 131 | T | A | 0.0000 | |
| 132 | C | A | 0.8796 | |
| 133 | S | A | 0.0000 | |
| 134 | T | A | 0.0000 | |
| 135 | L | A | 1.2719 | |
| 136 | L | A | 1.2720 | |
| 137 | A | A | 0.0000 | |
| 138 | L | A | 1.3556 | |
| 139 | G | A | 0.4214 | |
| 140 | M | A | 0.7862 | |
| 141 | M | A | 0.0000 | |
| 142 | P | A | 0.7431 | |
| 143 | L | A | 1.6683 | |
| 144 | C | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | L | A | 1.8521 | |
| 147 | I | A | 2.3167 | |
| 148 | Y | A | 1.7213 | |
| 149 | T | A | 0.0000 | |
| 150 | K | A | -0.5788 | |
| 151 | M | A | -0.0530 | |
| 152 | W | A | -0.0260 | |
| 153 | V | A | -0.0972 | |
| 154 | D | A | -1.6915 | |
| 155 | S | A | -1.1083 | |
| 156 | G | A | -0.6055 | |
| 157 | S | A | 0.1078 | |
| 158 | I | A | 0.8500 | |
| 159 | V | A | 1.7837 | |
| 160 | I | A | 0.0000 | |
| 161 | P | A | -0.2497 | |
| 162 | Y | A | -0.4547 | |
| 163 | D | A | -2.0746 | |
| 164 | N | A | -1.2285 | |
| 165 | I | A | 0.0000 | |
| 166 | G | A | -0.4713 | |
| 167 | T | A | -0.1379 | |
| 168 | S | A | 0.0000 | |
| 169 | L | A | 0.0000 | |
| 170 | V | A | 2.2498 | |
| 171 | S | A | 1.3745 | |
| 172 | L | A | 0.0000 | |
| 173 | V | A | 2.4112 | |
| 174 | V | A | 2.7125 | |
| 175 | P | A | 1.9662 | |
| 176 | V | A | 0.0000 | |
| 177 | S | A | 1.8117 | |
| 178 | I | A | 2.2526 | |
| 179 | G | A | 0.0000 | |
| 180 | M | A | 0.8704 | |
| 181 | F | A | 1.3901 | |
| 182 | V | A | 0.0000 | |
| 183 | N | A | 0.0000 | |
| 184 | H | A | -1.1958 | |
| 185 | K | A | -1.8059 | |
| 186 | W | A | -1.3197 | |
| 187 | P | A | -1.6104 | |
| 188 | Q | A | -2.2015 | |
| 189 | K | A | -1.9505 | |
| 190 | A | A | 0.0000 | |
| 191 | K | A | -1.7550 | |
| 192 | I | A | 0.1696 | |
| 193 | I | A | 0.3008 | |
| 194 | L | A | -0.0249 | |
| 195 | K | A | -0.3259 | |
| 196 | I | A | 1.5055 | |
| 197 | G | A | 0.0000 | |
| 198 | S | A | 1.0374 | |
| 199 | I | A | 2.1361 | |
| 200 | A | A | 0.0000 | |
| 201 | G | A | 0.0000 | |
| 202 | A | A | 1.9743 | |
| 203 | I | A | 2.9614 | |
| 204 | L | A | 0.0000 | |
| 205 | I | A | 2.1554 | |
| 206 | V | A | 3.2133 | |
| 207 | L | A | 2.5379 | |
| 208 | I | A | 0.0000 | |
| 209 | A | A | 2.1709 | |
| 210 | V | A | 2.9817 | |
| 211 | V | A | 0.0000 | |
| 212 | G | A | 0.0000 | |
| 213 | G | A | 1.5901 | |
| 214 | I | A | 2.3968 | |
| 215 | L | A | 1.4689 | |
| 216 | Y | A | 0.5523 | |
| 217 | Q | A | 0.1178 | |
| 218 | S | A | 0.5576 | |
| 219 | A | A | 0.0000 | |
| 220 | W | A | 2.1551 | |
| 221 | I | A | 2.5733 | |
| 222 | I | A | 1.6900 | |
| 223 | A | A | 0.8671 | |
| 224 | P | A | 0.2825 | |
| 225 | K | A | -0.2726 | |
| 226 | L | A | 0.0000 | |
| 227 | W | A | 1.2089 | |
| 228 | I | A | 1.7895 | |
| 229 | I | A | 0.0000 | |
| 230 | G | A | 0.0000 | |
| 231 | T | A | 1.5784 | |
| 232 | I | A | 1.6332 | |
| 233 | F | A | 0.0000 | |
| 234 | P | A | 0.0000 | |
| 235 | V | A | 0.9604 | |
| 236 | A | A | 0.7005 | |
| 237 | G | A | 0.0000 | |
| 238 | Y | A | 0.0000 | |
| 239 | S | A | 0.8505 | |
| 240 | L | A | 1.3306 | |
| 241 | G | A | 0.0000 | |
| 242 | F | A | 1.4722 | |
| 243 | L | A | 2.1609 | |
| 244 | L | A | 1.8605 | |
| 245 | A | A | 0.0000 | |
| 246 | R | A | 0.7945 | |
| 247 | I | A | 1.9944 | |
| 248 | A | A | 0.9628 | |
| 249 | G | A | 0.2578 | |
| 250 | L | A | 0.0000 | |
| 251 | P | A | -0.1646 | |
| 252 | W | A | 0.5390 | |
| 253 | Y | A | 0.0000 | |
| 254 | R | A | -0.6066 | |
| 255 | C | A | 0.0000 | |
| 256 | R | A | -0.0002 | |
| 257 | T | A | 0.0000 | |
| 258 | V | A | 0.0000 | |
| 259 | A | A | 0.0000 | |
| 260 | F | A | 0.0000 | |
| 261 | E | A | 0.0000 | |
| 262 | T | A | 0.0000 | |
| 263 | G | A | 0.0000 | |
| 264 | M | A | 0.0000 | |
| 265 | Q | A | 0.0000 | |
| 266 | N | A | 0.0000 | |
| 267 | T | A | 0.0000 | |
| 268 | Q | A | -0.0568 | |
| 269 | L | A | 0.0000 | |
| 270 | C | A | 0.0000 | |
| 271 | S | A | 0.0000 | |
| 272 | T | A | 0.0000 | |
| 273 | I | A | 0.0000 | |
| 274 | V | A | 0.0000 | |
| 275 | Q | A | 0.0879 | |
| 276 | L | A | 0.7324 | |
| 277 | S | A | 0.0000 | |
| 278 | F | A | 0.0000 | |
| 279 | T | A | -0.8918 | |
| 280 | P | A | -1.1402 | |
| 281 | E | A | -2.1587 | |
| 282 | E | A | -1.4038 | |
| 283 | L | A | 0.0000 | |
| 284 | N | A | -0.4214 | |
| 285 | V | A | 0.8907 | |
| 286 | V | A | 0.0000 | |
| 287 | F | A | 0.0000 | |
| 288 | T | A | 0.7228 | |
| 289 | F | A | 0.0000 | |
| 290 | P | A | 0.0000 | |
| 291 | L | A | 0.9785 | |
| 292 | I | A | 0.0000 | |
| 293 | Y | A | 0.0000 | |
| 294 | S | A | 0.0000 | |
| 295 | I | A | 2.7665 | |
| 296 | F | A | 2.2466 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | 2.6028 | |
| 299 | A | A | 1.9864 | |
| 300 | F | A | 1.8911 | |
| 301 | A | A | 0.0000 | |
| 302 | A | A | 1.6037 | |
| 303 | I | A | 2.2552 | |
| 304 | F | A | 2.1766 | |
| 305 | L | A | 1.9678 | |
| 306 | G | A | 1.6842 | |
| 307 | F | A | 2.6347 | |
| 308 | Y | A | 1.5599 | |
| 309 | V | A | 1.1745 | |
| 310 | A | A | 0.7626 | |
| 311 | Y | A | 0.9020 | |
| 312 | K | A | -1.6417 | |
| 313 | K | A | -1.8086 | |
| 314 | C | A | -0.7181 | |
| 315 | H | A | -1.9346 | |
| 316 | G | A | -2.7535 | |
| 317 | K | A | -3.7992 | |
| 318 | N | A | -3.3031 | |
| 319 | K | A | -2.7324 | |
| 320 | A | A | -1.3494 | |
| 321 | E | A | -1.1074 | |
| 322 | I | A | -0.1740 | |
| 323 | P | A | -1.1036 | |
| 324 | E | A | -2.4739 | |
| 325 | S | A | -2.5849 | |
| 326 | K | A | -3.7199 | |
| 327 | E | A | -3.7735 | |
| 328 | N | A | -3.1985 | |
| 329 | G | A | -2.5786 | |
| 330 | T | A | -2.1285 | |
| 331 | E | A | -2.7866 | |
| 332 | P | A | -2.1699 | |
| 333 | E | A | -2.3245 | |
| 334 | S | A | -0.8115 | |
| 335 | S | A | 0.0773 | |
| 336 | F | A | 1.7383 | |
| 337 | Y | A | 1.1478 | |
| 338 | K | A | -0.9178 | |
| 339 | A | A | -0.7988 | |
| 340 | N | A | -1.5521 | |
| 341 | G | A | -1.2779 | |
| 342 | G | A | -0.3080 | |
| 343 | F | A | 0.6187 | |
| 344 | Q | A | -1.2062 | |
| 345 | P | A | -1.8725 | |
| 346 | D | A | -3.2605 | |
| 347 | E | A | -3.7308 | |
| 348 | K | A | -3.0351 |