Project name: query_structure

Status: done

Started: 2026-03-16 20:32:14
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Chain sequence(s) A: LPAPKNLVVSRVTEDSARLSWHDATWQYFDSFLIQYQESEKVGEAIVLIVPGSERSYDLTGLKPGTEYTVSIYGVFHRKHIDFVSNPLSAIFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:51)
Show buried residues

Minimal score value
-3.0473
Maximal score value
2.4151
Average score
-0.5072
Total score value
-47.673

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 1.0834
2 P A -0.1627
3 A A -0.7564
4 P A 0.0000
5 K A -2.1123
6 N A -1.6714
7 L A -0.3232
8 V A 1.1361
9 V A 0.7274
10 S A -0.5593
11 R A -1.9628
12 V A -0.9647
13 T A -1.7734
14 E A -3.0106
15 D A -2.6888
16 S A -1.9872
17 A A 0.0000
18 R A -1.0901
19 L A 0.0000
20 S A -0.4494
21 W A 0.0000
22 H A -2.1820
23 D A -1.5675
24 A A 0.0000
25 T A 0.0680
26 W A 1.1957
27 Q A 0.7671
28 Y A 1.0485
29 F A 0.0000
30 D A -1.2498
31 S A -0.1036
32 F A 0.0000
33 L A 1.5281
34 I A 0.0000
35 Q A 0.9475
36 Y A 0.4429
37 Q A -0.7008
38 E A -1.6150
39 S A -1.3718
40 E A -2.3140
41 K A -1.9258
42 V A -0.0226
43 G A -0.9000
44 E A -1.5043
45 A A -0.1635
46 I A 1.2167
47 V A 2.0838
48 L A 2.1790
49 I A 2.4151
50 V A 0.0000
51 P A -0.4203
52 G A 0.0000
53 S A -0.9096
54 E A -1.5900
55 R A -1.3275
56 S A -0.7052
57 Y A -0.5823
58 D A -1.3337
59 L A 0.0000
60 T A -1.3461
61 G A -1.4847
62 L A 0.0000
63 K A -2.9148
64 P A -2.4484
65 G A -1.7117
66 T A -1.9656
67 E A -1.3942
68 Y A 0.0000
69 T A 0.1141
70 V A 0.0000
71 S A 0.1972
72 I A 0.0000
73 Y A 0.7262
74 G A 0.0000
75 V A 0.0000
76 F A -0.3769
77 H A -2.1713
78 R A -3.0473
79 K A -2.8705
80 H A -1.8717
81 I A -0.2809
82 D A -1.2471
83 F A 0.8454
84 V A 1.6274
85 S A 0.0000
86 N A -0.7312
87 P A -0.4343
88 L A -0.5798
89 S A 0.1286
90 A A 1.1952
91 I A 1.9213
92 F A 0.0000
93 T A -0.5921
94 T A -1.7975
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Laboratory of Theory of Biopolymers 2018