| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWHDATWQYFDSFLIQYQESEKVGEAIVLIVPGSERSYDLTGLKPGTEYTVSIYGVFHRKHIDFVSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.0834 | |
| 2 | P | A | -0.1627 | |
| 3 | A | A | -0.7564 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.1123 | |
| 6 | N | A | -1.6714 | |
| 7 | L | A | -0.3232 | |
| 8 | V | A | 1.1361 | |
| 9 | V | A | 0.7274 | |
| 10 | S | A | -0.5593 | |
| 11 | R | A | -1.9628 | |
| 12 | V | A | -0.9647 | |
| 13 | T | A | -1.7734 | |
| 14 | E | A | -3.0106 | |
| 15 | D | A | -2.6888 | |
| 16 | S | A | -1.9872 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.0901 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.4494 | |
| 21 | W | A | 0.0000 | |
| 22 | H | A | -2.1820 | |
| 23 | D | A | -1.5675 | |
| 24 | A | A | 0.0000 | |
| 25 | T | A | 0.0680 | |
| 26 | W | A | 1.1957 | |
| 27 | Q | A | 0.7671 | |
| 28 | Y | A | 1.0485 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -1.2498 | |
| 31 | S | A | -0.1036 | |
| 32 | F | A | 0.0000 | |
| 33 | L | A | 1.5281 | |
| 34 | I | A | 0.0000 | |
| 35 | Q | A | 0.9475 | |
| 36 | Y | A | 0.4429 | |
| 37 | Q | A | -0.7008 | |
| 38 | E | A | -1.6150 | |
| 39 | S | A | -1.3718 | |
| 40 | E | A | -2.3140 | |
| 41 | K | A | -1.9258 | |
| 42 | V | A | -0.0226 | |
| 43 | G | A | -0.9000 | |
| 44 | E | A | -1.5043 | |
| 45 | A | A | -0.1635 | |
| 46 | I | A | 1.2167 | |
| 47 | V | A | 2.0838 | |
| 48 | L | A | 2.1790 | |
| 49 | I | A | 2.4151 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.4203 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -0.9096 | |
| 54 | E | A | -1.5900 | |
| 55 | R | A | -1.3275 | |
| 56 | S | A | -0.7052 | |
| 57 | Y | A | -0.5823 | |
| 58 | D | A | -1.3337 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3461 | |
| 61 | G | A | -1.4847 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9148 | |
| 64 | P | A | -2.4484 | |
| 65 | G | A | -1.7117 | |
| 66 | T | A | -1.9656 | |
| 67 | E | A | -1.3942 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | 0.1141 | |
| 70 | V | A | 0.0000 | |
| 71 | S | A | 0.1972 | |
| 72 | I | A | 0.0000 | |
| 73 | Y | A | 0.7262 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | F | A | -0.3769 | |
| 77 | H | A | -2.1713 | |
| 78 | R | A | -3.0473 | |
| 79 | K | A | -2.8705 | |
| 80 | H | A | -1.8717 | |
| 81 | I | A | -0.2809 | |
| 82 | D | A | -1.2471 | |
| 83 | F | A | 0.8454 | |
| 84 | V | A | 1.6274 | |
| 85 | S | A | 0.0000 | |
| 86 | N | A | -0.7312 | |
| 87 | P | A | -0.4343 | |
| 88 | L | A | -0.5798 | |
| 89 | S | A | 0.1286 | |
| 90 | A | A | 1.1952 | |
| 91 | I | A | 1.9213 | |
| 92 | F | A | 0.0000 | |
| 93 | T | A | -0.5921 | |
| 94 | T | A | -1.7975 |