| Chain sequence(s) |
A: ESCVFIPCITGVIGCSCSSNVCYLNGVPCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:14)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | 0.2254 | |
| 2 | S | A | 0.9627 | |
| 3 | C | A | 1.7828 | |
| 4 | V | A | 2.6343 | |
| 5 | F | A | 3.0157 | |
| 6 | I | A | 2.4266 | |
| 7 | P | A | 1.4659 | |
| 8 | C | A | 1.9754 | |
| 9 | I | A | 2.6114 | |
| 10 | T | A | 2.0556 | |
| 11 | G | A | 1.8451 | |
| 12 | V | A | 2.9292 | |
| 13 | I | A | 2.9042 | |
| 14 | G | A | 1.1113 | |
| 15 | C | A | 0.0000 | |
| 16 | S | A | 0.6212 | |
| 17 | C | A | 0.7076 | |
| 18 | S | A | 0.0571 | |
| 19 | S | A | -0.2734 | |
| 20 | N | A | -0.0020 | |
| 21 | V | A | 0.4333 | |
| 22 | C | A | 0.0000 | |
| 23 | Y | A | 0.4760 | |
| 24 | L | A | 0.5021 | |
| 25 | N | A | -0.7629 | |
| 26 | G | A | -0.0635 | |
| 27 | V | A | 1.3073 | |
| 28 | P | A | 0.5476 | |
| 29 | C | A | 0.6102 | |
| 30 | G | A | -0.2195 |