| Chain sequence(s) |
A: GTIFDCGESCFLGTCYTKGCSCGEWKLCYGANG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.8564 | |
| 2 | T | A | 0.1442 | |
| 3 | I | A | 1.2087 | |
| 4 | F | A | 1.2559 | |
| 5 | D | A | -0.9871 | |
| 6 | C | A | -0.2257 | |
| 7 | G | A | -0.0655 | |
| 8 | E | A | 0.0800 | |
| 9 | S | A | 0.7473 | |
| 10 | C | A | 0.0000 | |
| 11 | F | A | 2.4330 | |
| 12 | L | A | 2.1434 | |
| 13 | G | A | 0.9348 | |
| 14 | T | A | 0.9160 | |
| 15 | C | A | 0.7164 | |
| 16 | Y | A | 0.7585 | |
| 17 | T | A | -0.5279 | |
| 18 | K | A | -1.5507 | |
| 19 | G | A | -1.4527 | |
| 20 | C | A | -0.6015 | |
| 21 | S | A | -0.1062 | |
| 22 | C | A | 0.5556 | |
| 23 | G | A | -0.4691 | |
| 24 | E | A | -1.4851 | |
| 25 | W | A | 0.1806 | |
| 26 | K | A | -0.0130 | |
| 27 | L | A | 0.5285 | |
| 28 | C | A | 0.0000 | |
| 29 | Y | A | 0.6521 | |
| 30 | G | A | 0.0000 | |
| 31 | A | A | -1.0760 | |
| 32 | N | A | -1.8491 | |
| 33 | G | A | -1.3307 |