| Chain sequence(s) |
A: FLDTADACSASQVYSCLRRGGSLNY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:07)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 18 | F | A | 1.8242 | |
| 19 | L | A | 1.1233 | |
| 20 | D | A | -1.1831 | |
| 21 | T | A | -0.5394 | |
| 22 | A | A | -0.1955 | |
| 23 | D | A | -1.3515 | |
| 24 | A | A | -0.7719 | |
| 25 | C | A | -0.4477 | |
| 26 | S | A | -0.7690 | |
| 27 | A | A | -0.2804 | |
| 28 | S | A | -0.2067 | |
| 29 | Q | A | -0.3880 | |
| 30 | V | A | 0.8860 | |
| 31 | Y | A | 0.9190 | |
| 32 | S | A | 0.1871 | |
| 33 | C | A | 0.4855 | |
| 34 | L | A | -0.3407 | |
| 35 | R | A | -2.4719 | |
| 36 | R | A | -2.7684 | |
| 37 | G | A | -2.0220 | |
| 38 | G | A | -1.3952 | |
| 39 | S | A | -0.7747 | |
| 40 | L | A | 0.4489 | |
| 41 | N | A | -0.3777 | |
| 42 | Y | A | 0.8316 |