| Chain sequence(s) |
A: KLDLKLDLKLDL
C: KLDLKLDLKLDL B: KLDLKLDLKLDL D: KLDLKLDLKLDL input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:28)
[INFO] Main: Simulation completed successfully. (00:02:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.5548 | |
| 2 | L | A | -0.9718 | |
| 3 | D | A | -2.6619 | |
| 4 | L | A | -1.3586 | |
| 5 | K | A | -2.8988 | |
| 6 | L | A | -1.3884 | |
| 7 | D | A | -2.4476 | |
| 8 | L | A | -0.9090 | |
| 9 | K | A | -1.9776 | |
| 10 | L | A | -0.6335 | |
| 11 | D | A | -1.2701 | |
| 12 | L | A | 0.7379 | |
| 1 | K | B | -1.6914 | |
| 2 | L | B | -0.5178 | |
| 3 | D | B | -2.1312 | |
| 4 | L | B | -0.7104 | |
| 5 | K | B | -2.4214 | |
| 6 | L | B | -1.0795 | |
| 7 | D | B | -2.6517 | |
| 8 | L | B | -1.2588 | |
| 9 | K | B | -2.4232 | |
| 10 | L | B | -0.8297 | |
| 11 | D | B | -1.5078 | |
| 12 | L | B | 0.5273 | |
| 1 | K | C | -1.9571 | |
| 2 | L | C | -0.8688 | |
| 3 | D | C | -2.4603 | |
| 4 | L | C | -0.8650 | |
| 5 | K | C | -2.4809 | |
| 6 | L | C | -1.0869 | |
| 7 | D | C | -2.5601 | |
| 8 | L | C | -1.0117 | |
| 9 | K | C | -2.1175 | |
| 10 | L | C | -0.5856 | |
| 11 | D | C | -1.5434 | |
| 12 | L | C | 0.5409 | |
| 1 | K | D | -1.3756 | |
| 2 | L | D | -0.4685 | |
| 3 | D | D | -1.9343 | |
| 4 | L | D | -0.9804 | |
| 5 | K | D | -2.8328 | |
| 6 | L | D | -1.3953 | |
| 7 | D | D | -2.6115 | |
| 8 | L | D | -1.2305 | |
| 9 | K | D | -2.5689 | |
| 10 | L | D | -1.1670 | |
| 11 | D | D | -1.8155 | |
| 12 | L | D | 0.3511 |