Project name: fold_rfinf_36_22024_10_30_14_46_model_0

Status: done

Started: 2026-03-26 12:04:28
Settings
Chain sequence(s) B: AAAAAAAAQAKKVLDAQKAAKAEEAANKAAAEAAAKLAALLAE
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:44)
Show buried residues

Minimal score value
-4.5672
Maximal score value
1.9183
Average score
-1.5738
Total score value
-67.6748

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A B 0.1457
2 A B 0.1699
3 A B 0.1875
4 A B 0.0685
5 A B -0.0263
6 A B -0.3654
7 A B -0.7325
8 A B -1.1611
9 Q B -1.9990
10 A B -1.5990
11 K B -2.9751
12 K B -3.0577
13 V B -1.4739
14 L B -1.8131
15 D B -2.9757
16 A B -2.1938
17 Q B -2.9073
18 K B -3.6803
19 A B -2.7407
20 A B -3.0205
21 K B -4.2187
22 A B -3.3831
23 E B -4.1939
24 E B -4.5672
25 A B -3.2716
26 A B -2.7893
27 N B -3.7281
28 K B -3.7472
29 A B -2.4154
30 A B -1.9318
31 A B -2.0304
32 E B -2.6227
33 A B -1.1829
34 A B -0.4080
35 A B -0.6198
36 K B -0.7253
37 L B 1.3043
38 A B 0.9078
39 A B 0.5533
40 L B 1.7933
41 L B 1.9183
42 A B 0.4664
43 E B -0.6330
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Laboratory of Theory of Biopolymers 2018