| Chain sequence(s) |
B: AAAAAAAAQAKKVLDAQKAAKAEEAANKAAAEAAAKLAALLAE
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | 0.1457 | |
| 2 | A | B | 0.1699 | |
| 3 | A | B | 0.1875 | |
| 4 | A | B | 0.0685 | |
| 5 | A | B | -0.0263 | |
| 6 | A | B | -0.3654 | |
| 7 | A | B | -0.7325 | |
| 8 | A | B | -1.1611 | |
| 9 | Q | B | -1.9990 | |
| 10 | A | B | -1.5990 | |
| 11 | K | B | -2.9751 | |
| 12 | K | B | -3.0577 | |
| 13 | V | B | -1.4739 | |
| 14 | L | B | -1.8131 | |
| 15 | D | B | -2.9757 | |
| 16 | A | B | -2.1938 | |
| 17 | Q | B | -2.9073 | |
| 18 | K | B | -3.6803 | |
| 19 | A | B | -2.7407 | |
| 20 | A | B | -3.0205 | |
| 21 | K | B | -4.2187 | |
| 22 | A | B | -3.3831 | |
| 23 | E | B | -4.1939 | |
| 24 | E | B | -4.5672 | |
| 25 | A | B | -3.2716 | |
| 26 | A | B | -2.7893 | |
| 27 | N | B | -3.7281 | |
| 28 | K | B | -3.7472 | |
| 29 | A | B | -2.4154 | |
| 30 | A | B | -1.9318 | |
| 31 | A | B | -2.0304 | |
| 32 | E | B | -2.6227 | |
| 33 | A | B | -1.1829 | |
| 34 | A | B | -0.4080 | |
| 35 | A | B | -0.6198 | |
| 36 | K | B | -0.7253 | |
| 37 | L | B | 1.3043 | |
| 38 | A | B | 0.9078 | |
| 39 | A | B | 0.5533 | |
| 40 | L | B | 1.7933 | |
| 41 | L | B | 1.9183 | |
| 42 | A | B | 0.4664 | |
| 43 | E | B | -0.6330 |