| Chain sequence(s) |
A: LHYTDCTETGQNLCLCEGDNACVRGNRCILGSTKKDNKCIPGYGKAMHQNKPDEESEQFSYDDDDDK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:06)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:06)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:06)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:06)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:06)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:43)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.1287 | |
| 2 | H | A | 0.1179 | |
| 3 | Y | A | -0.0860 | |
| 4 | T | A | -0.9519 | |
| 5 | D | A | -2.4943 | |
| 6 | C | A | 0.0000 | |
| 7 | T | A | -1.4402 | |
| 8 | E | A | -2.1316 | |
| 9 | T | A | -1.1616 | |
| 10 | G | A | -0.8008 | |
| 11 | Q | A | 0.0000 | |
| 12 | N | A | 0.0000 | |
| 13 | L | A | -0.3678 | |
| 14 | C | A | 0.0000 | |
| 15 | L | A | -1.7365 | |
| 16 | C | A | 0.0000 | |
| 17 | E | A | -3.6190 | |
| 18 | G | A | -3.2353 | |
| 19 | D | A | -3.1405 | |
| 20 | N | A | -2.4088 | |
| 21 | A | A | -1.1457 | |
| 22 | C | A | 0.0000 | |
| 23 | V | A | 0.7236 | |
| 24 | R | A | -1.2415 | |
| 25 | G | A | -0.5969 | |
| 26 | N | A | -0.6271 | |
| 27 | R | A | -1.0273 | |
| 28 | C | A | 0.0000 | |
| 29 | I | A | -0.6272 | |
| 30 | L | A | -1.2110 | |
| 31 | G | A | -2.1683 | |
| 32 | S | A | -1.5016 | |
| 33 | T | A | -1.7966 | |
| 34 | K | A | -3.1052 | |
| 35 | K | A | -3.7722 | |
| 36 | D | A | -3.8612 | |
| 37 | N | A | -2.7914 | |
| 38 | K | A | -2.6611 | |
| 39 | C | A | -1.1468 | |
| 40 | I | A | -0.2300 | |
| 41 | P | A | -0.2159 | |
| 42 | G | A | -0.0887 | |
| 43 | Y | A | 0.2955 | |
| 44 | G | A | -0.7623 | |
| 45 | K | A | -2.2081 | |
| 46 | A | A | -1.3211 | |
| 47 | M | A | -1.3462 | |
| 48 | H | A | -2.0101 | |
| 49 | Q | A | -2.3271 | |
| 50 | N | A | -3.0432 | |
| 51 | K | A | -3.3805 | |
| 52 | P | A | -2.9341 | |
| 53 | D | A | -3.8607 | |
| 54 | E | A | -4.0620 | |
| 55 | E | A | -3.9733 | |
| 56 | S | A | -2.8470 | |
| 57 | E | A | -2.7039 | |
| 58 | Q | A | -1.4688 | |
| 59 | F | A | 0.0293 | |
| 60 | S | A | -0.5985 | |
| 61 | Y | A | -0.7932 | |
| 62 | D | A | -2.7331 | |
| 63 | D | A | -3.4231 | |
| 64 | D | A | -4.0892 | |
| 65 | D | A | -4.5826 | |
| 66 | D | A | -4.0819 | |
| 67 | K | A | -3.2887 |