| Chain sequence(s) |
A: MPSPPGNLRVTDVTSTSVTLSWRHPFPTRGYRVEYREAGGEWKEVTVPLQPPTYTVTGLKPGTEYEPRVRAVNDGRNGRLLSIPSSVSVTTEIDKPSQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.3961 | |
| 2 | P | A | 0.0000 | |
| 3 | S | A | 0.6055 | |
| 4 | P | A | 0.1881 | |
| 5 | P | A | 0.0000 | |
| 6 | G | A | -1.7962 | |
| 7 | N | A | -2.3483 | |
| 8 | L | A | -1.8039 | |
| 9 | R | A | -2.3921 | |
| 10 | V | A | -1.0024 | |
| 11 | T | A | -1.0164 | |
| 12 | D | A | -1.5328 | |
| 13 | V | A | -0.4959 | |
| 14 | T | A | -1.0122 | |
| 15 | S | A | -1.4147 | |
| 16 | T | A | -1.0393 | |
| 17 | S | A | -0.7898 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.6562 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -1.3665 | |
| 22 | W | A | 0.0000 | |
| 23 | R | A | -2.3599 | |
| 24 | H | A | 0.0000 | |
| 25 | P | A | 0.0000 | |
| 26 | F | A | 1.2732 | |
| 27 | P | A | 0.1023 | |
| 28 | T | A | 0.0000 | |
| 29 | R | A | -2.3986 | |
| 30 | G | A | -1.8144 | |
| 31 | Y | A | 0.0000 | |
| 32 | R | A | -1.2851 | |
| 33 | V | A | 0.0000 | |
| 34 | E | A | -1.9228 | |
| 35 | Y | A | 0.0000 | |
| 36 | R | A | -2.3256 | |
| 37 | E | A | -2.2175 | |
| 38 | A | A | -1.4734 | |
| 39 | G | A | -1.3287 | |
| 40 | G | A | -1.8709 | |
| 41 | E | A | -2.5577 | |
| 42 | W | A | -2.0237 | |
| 43 | K | A | -2.7488 | |
| 44 | E | A | -2.3599 | |
| 45 | V | A | -0.9370 | |
| 46 | T | A | -0.5987 | |
| 47 | V | A | 0.0000 | |
| 48 | P | A | -0.9329 | |
| 49 | L | A | -1.1108 | |
| 50 | Q | A | -1.4964 | |
| 51 | P | A | -1.1550 | |
| 52 | P | A | -0.9745 | |
| 53 | T | A | -0.6595 | |
| 54 | Y | A | 0.0428 | |
| 55 | T | A | -0.1459 | |
| 56 | V | A | 0.0000 | |
| 57 | T | A | -0.5221 | |
| 58 | G | A | -0.9323 | |
| 59 | L | A | 0.0000 | |
| 60 | K | A | -2.4276 | |
| 61 | P | A | -1.9051 | |
| 62 | G | A | -1.3442 | |
| 63 | T | A | -1.6192 | |
| 64 | E | A | -2.6981 | |
| 65 | Y | A | 0.0000 | |
| 66 | E | A | -1.3203 | |
| 67 | P | A | 0.0000 | |
| 68 | R | A | -1.0050 | |
| 69 | V | A | 0.0000 | |
| 70 | R | A | -0.4225 | |
| 71 | A | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | N | A | -1.9605 | |
| 74 | D | A | -3.6090 | |
| 75 | G | A | -2.6011 | |
| 76 | R | A | -3.1953 | |
| 77 | N | A | -2.8931 | |
| 78 | G | A | -2.6990 | |
| 79 | R | A | -3.1560 | |
| 80 | L | A | -1.0679 | |
| 81 | L | A | 0.2046 | |
| 82 | S | A | 0.0000 | |
| 83 | I | A | 1.6184 | |
| 84 | P | A | 0.2805 | |
| 85 | S | A | -0.3459 | |
| 86 | S | A | -0.4938 | |
| 87 | V | A | -0.4113 | |
| 88 | S | A | -0.8563 | |
| 89 | V | A | 0.0000 | |
| 90 | T | A | -1.2011 | |
| 91 | T | A | 0.0000 | |
| 92 | E | A | -1.6694 | |
| 93 | I | A | -0.7080 | |
| 94 | D | A | -2.5399 | |
| 95 | K | A | -2.6760 | |
| 96 | P | A | -1.7559 | |
| 97 | S | A | -1.7027 | |
| 98 | Q | A | -1.6923 |