| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAYVHDGADVRVPFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPDGHPLPDAPPPSPLYVPPPASSPYAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPENNVYNPECFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9412 | |
| 2 | L | A | 1.9620 | |
| 3 | P | A | 0.8327 | |
| 4 | P | A | 0.3789 | |
| 5 | T | A | 0.1285 | |
| 6 | T | A | 0.1341 | |
| 7 | P | A | 0.1910 | |
| 8 | V | A | 1.2055 | |
| 9 | A | A | 0.0898 | |
| 10 | K | A | -1.0191 | |
| 11 | V | A | -0.1666 | |
| 12 | Q | A | -1.3968 | |
| 13 | S | A | -1.5355 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3719 | |
| 16 | E | A | -2.4149 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4689 | |
| 20 | P | A | 0.1327 | |
| 21 | T | A | 0.1754 | |
| 22 | S | A | -0.1003 | |
| 23 | L | A | 0.0797 | |
| 24 | F | A | -0.0489 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2810 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8942 | |
| 31 | R | A | -2.6802 | |
| 32 | L | A | -0.8012 | |
| 33 | L | A | 1.1528 | |
| 34 | T | A | 1.3619 | |
| 35 | V | A | 1.8203 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2288 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6295 | |
| 40 | K | A | -1.6339 | |
| 41 | D | A | -0.9258 | |
| 42 | I | A | 0.8217 | |
| 43 | V | A | 0.8896 | |
| 44 | K | A | -1.4226 | |
| 45 | D | A | -2.4443 | |
| 46 | G | A | -1.4852 | |
| 47 | K | A | -1.1411 | |
| 48 | V | A | 1.3496 | |
| 49 | V | A | 1.9461 | |
| 50 | V | A | 1.2325 | |
| 51 | P | A | 0.4313 | |
| 52 | K | A | -0.6501 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1527 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3874 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2605 | |
| 70 | K | A | -1.7824 | |
| 71 | F | A | -0.6290 | |
| 72 | A | A | -0.5659 | |
| 73 | L | A | -0.8524 | |
| 74 | P | A | -1.2667 | |
| 75 | Q | A | -2.5059 | |
| 76 | K | A | -3.1069 | |
| 77 | D | A | -2.9930 | |
| 78 | F | A | -1.6696 | |
| 79 | Y | A | -1.8944 | |
| 80 | D | A | -2.6949 | |
| 81 | P | A | -2.3020 | |
| 82 | E | A | -3.0508 | |
| 83 | K | A | -3.3955 | |
| 84 | E | A | -2.4601 | |
| 85 | R | A | -1.2919 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6771 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9567 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3484 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6959 | |
| 99 | G | A | -0.5405 | |
| 100 | P | A | -0.4092 | |
| 101 | L | A | 0.0332 | |
| 102 | G | A | -0.2059 | |
| 103 | K | A | -0.5625 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3506 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1288 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3066 | |
| 110 | L | A | 0.3681 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0082 | |
| 113 | K | A | -0.3853 | |
| 114 | L | A | -0.8940 | |
| 115 | G | A | -0.6274 | |
| 116 | D | A | -1.1622 | |
| 117 | T | A | -0.7171 | |
| 118 | E | A | -1.6741 | |
| 119 | N | A | -1.9376 | |
| 120 | P | A | -1.1797 | |
| 121 | T | A | -0.5235 | |
| 122 | A | A | 0.0244 | |
| 123 | Y | A | 0.6609 | |
| 124 | V | A | 0.2570 | |
| 125 | H | A | -0.5998 | |
| 126 | D | A | -1.8036 | |
| 127 | G | A | -1.6472 | |
| 128 | A | A | -1.3051 | |
| 129 | D | A | -2.0424 | |
| 130 | V | A | -1.2091 | |
| 131 | R | A | -0.8304 | |
| 132 | V | A | 0.2109 | |
| 133 | P | A | 0.1143 | |
| 134 | F | A | 0.1104 | |
| 135 | S | A | -0.1071 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5632 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2216 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1063 | |
| 157 | D | A | 0.2640 | |
| 158 | I | A | 0.8110 | |
| 159 | A | A | 0.1058 | |
| 160 | E | A | -1.4865 | |
| 161 | P | A | -0.2314 | |
| 162 | C | A | 0.1843 | |
| 163 | P | A | -0.1713 | |
| 164 | G | A | -0.0789 | |
| 165 | L | A | 0.5873 | |
| 166 | P | A | -0.1137 | |
| 167 | P | A | -0.3392 | |
| 168 | G | A | -0.4172 | |
| 169 | A | A | -0.0178 | |
| 170 | C | A | 0.7445 | |
| 171 | P | A | 0.5423 | |
| 172 | P | A | 0.7819 | |
| 173 | I | A | 2.0398 | |
| 174 | Q | A | 0.8456 | |
| 175 | L | A | 1.4440 | |
| 176 | V | A | 0.8347 | |
| 177 | N | A | -0.3035 | |
| 178 | S | A | 0.0267 | |
| 179 | V | A | 0.4337 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3824 | |
| 182 | D | A | 0.0772 | |
| 183 | G | A | -0.1608 | |
| 184 | D | A | -0.5520 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1496 | |
| 190 | F | A | 0.0656 | |
| 191 | G | A | -0.1023 | |
| 192 | N | A | -0.2813 | |
| 193 | M | A | -0.1524 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3977 | |
| 197 | E | A | -2.6143 | |
| 198 | L | A | -1.2126 | |
| 199 | Q | A | -2.5262 | |
| 200 | Q | A | -3.2915 | |
| 201 | D | A | -3.5145 | |
| 202 | R | A | -3.2921 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2182 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3506 | |
| 211 | S | A | -1.8910 | |
| 212 | T | A | -1.4522 | |
| 213 | R | A | -2.1481 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1708 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3320 | |
| 220 | L | A | 0.5953 | |
| 221 | K | A | -1.1286 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8196 | |
| 224 | N | A | -1.4985 | |
| 225 | E | A | -1.2346 | |
| 226 | A | A | -0.5998 | |
| 227 | Y | A | -0.3642 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6589 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0714 | |
| 234 | F | A | 0.2532 | |
| 235 | G | A | -0.8229 | |
| 236 | R | A | -2.6011 | |
| 237 | R | A | -2.8613 | |
| 238 | E | A | -2.1186 | |
| 239 | Q | A | -0.1680 | |
| 240 | V | A | 1.4959 | |
| 241 | Y | A | 1.2399 | |
| 242 | A | A | 0.3923 | |
| 243 | R | A | -0.5816 | |
| 244 | H | A | -0.7626 | |
| 245 | F | A | 0.1520 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8457 | |
| 249 | S | A | -1.2220 | |
| 250 | G | A | -1.1323 | |
| 251 | P | A | -1.1539 | |
| 252 | D | A | -1.4746 | |
| 253 | G | A | -1.3018 | |
| 254 | H | A | -1.4862 | |
| 255 | P | A | -1.3860 | |
| 256 | L | A | -0.3762 | |
| 257 | P | A | -0.8403 | |
| 258 | D | A | -1.8704 | |
| 259 | A | A | -0.6034 | |
| 260 | P | A | -0.6500 | |
| 261 | P | A | -0.1735 | |
| 262 | P | A | 0.0747 | |
| 263 | S | A | 0.3064 | |
| 264 | P | A | 0.6882 | |
| 265 | L | A | 1.8755 | |
| 266 | Y | A | 1.5254 | |
| 267 | V | A | 1.9241 | |
| 268 | P | A | 0.6491 | |
| 269 | P | A | 0.6040 | |
| 270 | P | A | 0.0013 | |
| 271 | A | A | 0.1717 | |
| 272 | S | A | 0.0196 | |
| 273 | S | A | 0.3409 | |
| 274 | P | A | 0.5363 | |
| 275 | Y | A | 1.3836 | |
| 276 | A | A | 0.9939 | |
| 277 | V | A | 1.4814 | |
| 278 | R | A | 0.1903 | |
| 279 | P | A | -0.2926 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.7283 | |
| 282 | D | A | -1.1607 | |
| 283 | Y | A | 0.7131 | |
| 284 | F | A | 0.6422 | |
| 285 | G | A | 0.3375 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 1.0188 | |
| 291 | L | A | 1.6273 | |
| 292 | V | A | 0.6356 | |
| 293 | S | A | -0.1630 | |
| 294 | S | A | -0.9659 | |
| 295 | D | A | -1.8434 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1001 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6156 | |
| 301 | R | A | -1.8207 | |
| 302 | P | A | -0.9476 | |
| 303 | F | A | -0.1975 | |
| 304 | W | A | -0.5781 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0907 | |
| 307 | R | A | -2.8337 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2679 | |
| 310 | G | A | -1.2267 | |
| 311 | N | A | -1.2640 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8230 | |
| 319 | N | A | -0.9369 | |
| 320 | E | A | -1.0401 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3374 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0630 | |
| 333 | N | A | 0.5711 | |
| 334 | F | A | 1.7412 | |
| 335 | T | A | 0.8534 | |
| 336 | I | A | 0.4088 | |
| 337 | S | A | -0.9886 | |
| 338 | Q | A | -1.7668 | |
| 339 | Q | A | -1.5832 | |
| 340 | L | A | 0.3617 | |
| 341 | C | A | 0.0248 | |
| 342 | T | A | -0.2925 | |
| 343 | P | A | -1.0104 | |
| 344 | E | A | -2.2089 | |
| 345 | N | A | -2.0313 | |
| 346 | N | A | -1.3782 | |
| 347 | V | A | 0.6663 | |
| 348 | Y | A | 0.8632 | |
| 349 | N | A | -0.6208 | |
| 350 | P | A | -1.0873 | |
| 351 | E | A | -1.8579 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -1.2845 | |
| 354 | K | A | -2.1058 | |
| 355 | N | A | -1.7903 | |
| 356 | Y | A | -0.1064 | |
| 357 | L | A | 0.6311 | |
| 358 | R | A | 0.9523 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3748 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0811 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0385 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6848 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3056 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3115 | |
| 376 | L | A | -1.7090 | |
| 377 | D | A | -1.9811 | |
| 378 | P | A | -1.0328 | |
| 379 | G | A | -1.0122 | |
| 380 | V | A | -0.9320 | |
| 381 | L | A | -0.5301 | |
| 382 | A | A | -0.6534 | |
| 383 | H | A | -0.8070 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4107 | |
| 386 | T | A | -0.5502 | |
| 387 | M | A | -0.3004 | |
| 388 | N | A | -0.8645 | |
| 389 | P | A | -1.2438 | |
| 390 | T | A | -1.4285 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4131 | |
| 393 | E | A | -2.7319 | |
| 394 | N | A | -2.3399 | |
| 395 | W | A | -1.3155 | |
| 396 | N | A | -1.0005 | |
| 397 | L | A | -0.1365 | |
| 398 | G | A | 0.5603 | |
| 399 | F | A | 2.4315 | |
| 400 | V | A | 1.8425 | |
| 401 | P | A | 0.0546 | |
| 402 | P | A | -1.8277 | |
| 403 | K | A | -3.3129 | |
| 404 | E | A | -3.7743 | |
| 405 | R | A | -3.9135 | |
| 406 | E | A | -3.7917 | |
| 407 | D | A | -2.8851 | |
| 408 | P | A | -1.7674 | |
| 409 | Y | A | -0.9915 | |
| 410 | K | A | -2.1161 | |
| 411 | G | A | -0.6411 | |
| 412 | L | A | 0.6770 | |
| 413 | I | A | 1.5885 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3944 | |
| 416 | E | A | -1.6943 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9520 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0517 | |
| 421 | E | A | -2.7806 | |
| 422 | R | A | -2.6317 | |
| 423 | F | A | -1.2839 | |
| 424 | S | A | -1.4807 | |
| 425 | Q | A | -1.9047 | |
| 426 | D | A | -2.9744 | |
| 427 | L | A | -2.1583 | |
| 428 | D | A | -3.0057 | |
| 429 | Q | A | -2.7430 | |
| 430 | F | A | -1.6020 | |
| 431 | A | A | -1.1339 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2678 | |
| 435 | K | A | -1.0833 | |
| 436 | F | A | -0.1032 | |
| 437 | L | A | 0.7908 | |
| 438 | Y | A | 0.6308 | |
| 439 | Q | A | -0.3885 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine