| Chain sequence(s) |
L: KPGTYAAGAAGD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 189 | K | L | -1.7450 | |
| 190 | P | L | -0.5812 | |
| 191 | G | L | -0.2034 | |
| 192 | T | L | 0.1424 | |
| 193 | Y | L | 1.3129 | |
| 194 | A | L | 0.3054 | |
| 195 | A | L | -0.0150 | |
| 196 | G | L | -0.4450 | |
| 197 | A | L | -0.0169 | |
| 198 | A | L | -0.0157 | |
| 199 | G | L | -0.7856 | |
| 200 | D | L | -1.8754 |