Project name: af17db204c45719 [mutate: KM135A, KV26A] [mutate: KI119A]

Status: done

Started: 2024-07-04 01:48:35
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Chain sequence(s) A: PALPEDGGSGAFPPGHFKDPKMLYCVNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVCANRYLAMKEDGRLLAHKLVTDECFFFERLESNNYNTYRSRKYTSWYVALKRTGQYKLGSKTGPGQMAILFLPMSAKS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues KI119A
Energy difference between WT (input) and mutated protein (by FoldX) 0.869875 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:00:56)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:42)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:34)
Show buried residues

Minimal score value
-3.6119
Maximal score value
0.9545
Average score
-0.9041
Total score value
-132.0031

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 P A 0.1362
2 A A -0.0449
3 L A 0.3576
4 P A -1.1937
5 E A -2.4623
6 D A -2.8085
7 G A -1.9870
8 G A -1.9720
9 S A -0.9491
10 G A -1.2645
11 A A -0.1794
12 F A 0.4921
13 P A 0.0597
14 P A -0.2867
15 G A -0.6641
16 H A -0.8381
17 F A 0.0959
18 K A -1.5631
19 D A -1.6318
20 P A -1.3079
21 K A -0.8932
22 M A 0.0000
23 L A 0.0000
24 Y A 0.3043
25 C A 0.0000
26 V A 0.9545
27 N A -0.1709
28 G A -0.8031
29 G A -0.5466
30 F A -1.1886
31 F A 0.0000
32 L A 0.0000
33 R A -1.1840
34 I A 0.0000
35 H A -1.8056
36 P A -2.0078
37 D A -2.8388
38 G A 0.0000
39 R A -2.6895
40 V A 0.0000
41 D A -1.1388
42 G A -1.1687
43 V A -1.8086
44 R A -3.0723
45 E A -3.6119
46 K A -3.2574
47 S A -2.1292
48 D A -1.9280
49 P A -0.9148
50 H A -0.7502
51 I A 0.0000
52 K A -1.1805
53 L A 0.0000
54 Q A -1.1574
55 L A -0.7944
56 Q A -1.1904
57 A A -1.1134
58 E A -1.8934
59 E A -2.6724
60 R A -2.6972
61 G A -1.7965
62 V A 0.0000
63 V A 0.0000
64 S A 0.0000
65 I A 0.0000
66 K A -1.0363
67 G A 0.0000
68 V A -0.0766
69 C A 0.0515
70 A A -1.3875
71 N A -1.7132
72 R A -1.6299
73 Y A -0.3856
74 L A 0.0000
75 A A 0.0000
76 M A 0.0000
77 K A -2.9406
78 E A -3.5495
79 D A -3.3504
80 G A 0.0000
81 R A -2.7035
82 L A 0.0000
83 L A -1.1024
84 A A 0.0000
85 H A -1.0481
86 K A -1.5871
87 L A 0.7139
88 V A 0.6669
89 T A -0.3681
90 D A -2.3170
91 E A -1.9299
92 C A 0.0000
93 F A -1.2427
94 F A 0.0000
95 F A -1.2650
96 E A -1.1270
97 R A -1.2983
98 L A -0.1934
99 E A -1.3528
100 S A -1.3744
101 N A -1.8737
102 N A -1.7889
103 Y A -0.5975
104 N A -0.6123
105 T A 0.0000
106 Y A 0.0000
107 R A -1.2935
108 S A 0.0000
109 R A -2.4829
110 K A -2.9595
111 Y A 0.0000
112 T A -0.8992
113 S A -0.8663
114 W A -0.8993
115 Y A 0.0000
116 V A 0.0000
117 A A 0.0000
118 L A 0.0000
119 I A -0.7911 mutated: KI119A
120 R A -1.7788
121 T A -1.2271
122 G A 0.0000
123 Q A -1.3207
124 Y A -1.1444
125 K A -1.2470
126 L A -1.5008
127 G A 0.0000
128 S A -1.7674
129 K A -1.8204
130 T A -1.1056
131 G A -0.7931
132 P A -0.5891
133 G A -0.6823
134 Q A -0.3886
135 M A 0.4092
136 A A 0.0000
137 I A 0.0000
138 L A 0.0000
139 F A 0.0000
140 L A 0.6002
141 P A 0.2249
142 M A -0.0627
143 S A -0.8903
144 A A 0.0000
145 K A -2.0316
146 S A -1.1199
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Laboratory of Theory of Biopolymers 2018