Project name: query_structure

Status: done

Started: 2026-03-16 23:04:06
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Chain sequence(s) A: DVQLQASGGGLVQAGGSLRISCAASGGALSDYNMGWFRQAPGKEREFVAVVTWSGGSTRYADSVNGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAAPLTPFQSLGDMKAYNYWGQGTQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:10)
Show buried residues

Minimal score value
-3.5962
Maximal score value
1.2587
Average score
-0.8701
Total score value
-108.7582

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.2480
2 V A 0.0000
3 Q A -2.1170
4 L A 0.0000
5 Q A -1.6409
6 A A 0.0000
7 S A -1.1781
8 G A -1.0237
9 G A -0.7990
10 G A -0.0233
11 L A 1.0740
12 V A 0.0900
13 Q A -1.1687
14 A A -1.3820
15 G A -1.3086
16 G A -0.8766
17 S A -1.2191
18 L A -1.0150
19 R A -2.1271
20 I A 0.0000
21 S A -0.8101
22 C A 0.0000
23 A A -1.1374
24 A A 0.0000
25 S A -1.3972
26 G A -1.5204
27 G A -1.3141
28 A A -1.0095
29 L A 0.0000
30 S A -1.1784
31 D A -1.4521
32 Y A -0.3210
33 N A 0.0000
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 F A 0.0000
38 R A -1.5969
39 Q A -2.2386
40 A A -2.0836
41 P A -1.3623
42 G A -1.9045
43 K A -3.3969
44 E A -3.5962
45 R A -2.7492
46 E A -2.8771
47 F A -1.4773
48 V A 0.0000
49 A A 0.0000
50 V A 0.0000
51 V A 0.0000
52 T A 0.0000
53 W A 0.0002
54 S A -0.6948
55 G A -0.7153
56 G A -0.5962
57 S A -0.4595
58 T A -0.5196
59 R A -1.1914
60 Y A -1.1004
61 A A -1.6115
62 D A -2.3934
63 S A -1.6857
64 V A 0.0000
65 N A -2.3096
66 G A -1.5738
67 R A -1.3436
68 F A 0.0000
69 T A -0.8578
70 I A 0.0000
71 S A -0.5873
72 R A -1.1249
73 D A -1.9757
74 N A -2.0294
75 A A -1.5177
76 K A -2.3319
77 N A -1.6824
78 T A 0.0000
79 V A 0.0000
80 Y A -0.6511
81 L A 0.0000
82 Q A -1.2130
83 M A 0.0000
84 N A -1.3843
85 S A -1.1857
86 L A 0.0000
87 K A -2.2561
88 P A -1.8790
89 E A -2.3337
90 D A 0.0000
91 T A -0.9260
92 A A 0.0000
93 V A -0.4242
94 Y A 0.0000
95 Y A -0.6767
96 C A 0.0000
97 A A 0.0000
98 A A 0.0000
99 A A 0.0000
100 P A 0.0666
101 L A 1.2587
102 T A 0.5358
103 P A -0.1276
104 F A -0.2387
105 Q A -1.3713
106 S A -1.0864
107 L A 0.0000
108 G A -1.2507
109 D A -1.6353
110 M A -1.3706
111 K A -2.0394
112 A A -1.0977
113 Y A 0.0000
114 N A -1.3073
115 Y A -0.5887
116 W A -0.4234
117 G A -0.9744
118 Q A -1.4766
119 G A -0.9977
120 T A -1.0588
121 Q A -0.9995
122 V A 0.0000
123 T A -0.2295
124 V A 0.0000
125 S A -0.7283
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Laboratory of Theory of Biopolymers 2018