| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAPQHCGPDDRVDFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGHPLPDAPPPSPLYVRPPPWSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPAPNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9418 | |
| 2 | L | A | 1.9618 | |
| 3 | P | A | 0.8358 | |
| 4 | P | A | 0.3795 | |
| 5 | T | A | 0.1272 | |
| 6 | T | A | 0.1354 | |
| 7 | P | A | 0.1864 | |
| 8 | V | A | 1.2162 | |
| 9 | A | A | 0.0942 | |
| 10 | K | A | -1.0063 | |
| 11 | V | A | -0.1250 | |
| 12 | Q | A | -1.3753 | |
| 13 | S | A | -1.5393 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4179 | |
| 16 | E | A | -2.4357 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4577 | |
| 20 | P | A | 0.1267 | |
| 21 | T | A | 0.1781 | |
| 22 | S | A | -0.0972 | |
| 23 | L | A | 0.1126 | |
| 24 | F | A | -0.0342 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2867 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8980 | |
| 31 | R | A | -2.6858 | |
| 32 | L | A | -0.8053 | |
| 33 | L | A | 1.1485 | |
| 34 | T | A | 1.3591 | |
| 35 | V | A | 1.8145 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2255 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6315 | |
| 40 | K | A | -1.6330 | |
| 41 | D | A | -0.9156 | |
| 42 | I | A | 0.8340 | |
| 43 | V | A | 1.0179 | |
| 44 | K | A | -1.1853 | |
| 45 | N | A | -1.9328 | |
| 46 | G | A | -1.2360 | |
| 47 | K | A | -0.9758 | |
| 48 | V | A | 1.4331 | |
| 49 | V | A | 2.0229 | |
| 50 | V | A | 1.2384 | |
| 51 | P | A | 0.4361 | |
| 52 | K | A | -0.6406 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1406 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3908 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2729 | |
| 70 | K | A | -1.7905 | |
| 71 | F | A | -0.6378 | |
| 72 | A | A | -0.5797 | |
| 73 | L | A | -0.8673 | |
| 74 | P | A | -1.2081 | |
| 75 | Q | A | -2.5056 | |
| 76 | K | A | -3.1085 | |
| 77 | D | A | -2.9886 | |
| 78 | F | A | -1.6541 | |
| 79 | Y | A | -1.8862 | |
| 80 | D | A | -2.6853 | |
| 81 | P | A | -2.3048 | |
| 82 | E | A | -3.0476 | |
| 83 | K | A | -3.3941 | |
| 84 | E | A | -2.4577 | |
| 85 | R | A | -1.2927 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6620 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9588 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3540 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6895 | |
| 99 | G | A | -0.5273 | |
| 100 | P | A | -0.3846 | |
| 101 | L | A | 0.0833 | |
| 102 | G | A | -0.2246 | |
| 103 | K | A | -0.7264 | |
| 104 | G | A | -0.5304 | |
| 105 | S | A | -0.5428 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.2207 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.3942 | |
| 110 | L | A | -0.2093 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3119 | |
| 113 | K | A | -0.5740 | |
| 114 | L | A | -0.8323 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.0880 | |
| 117 | T | A | -0.8767 | |
| 118 | E | A | -1.8379 | |
| 119 | N | A | -1.9879 | |
| 120 | P | A | -1.4305 | |
| 121 | T | A | -0.7613 | |
| 122 | A | A | -0.5729 | |
| 123 | P | A | -0.4483 | |
| 124 | Q | A | -0.8177 | |
| 125 | H | A | -0.8044 | |
| 126 | C | A | -0.9527 | |
| 127 | G | A | -1.2464 | |
| 128 | P | A | -1.3668 | |
| 129 | D | A | -2.2591 | |
| 130 | D | A | -1.7646 | |
| 131 | R | A | -1.5084 | |
| 132 | V | A | -0.7116 | |
| 133 | D | A | -1.4067 | |
| 134 | F | A | -0.6378 | |
| 135 | S | A | -0.5034 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6814 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2561 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5497 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2117 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1301 | |
| 157 | D | A | 0.3055 | |
| 158 | I | A | 0.8491 | |
| 159 | A | A | 0.1210 | |
| 160 | E | A | -1.4780 | |
| 161 | P | A | -0.2268 | |
| 162 | C | A | 0.1883 | |
| 163 | P | A | -0.1737 | |
| 164 | G | A | -0.0812 | |
| 165 | L | A | 0.5844 | |
| 166 | P | A | -0.1165 | |
| 167 | P | A | -0.3413 | |
| 168 | G | A | -0.4217 | |
| 169 | A | A | -0.0208 | |
| 170 | C | A | 0.7460 | |
| 171 | P | A | 0.5593 | |
| 172 | P | A | 0.7910 | |
| 173 | I | A | 2.0494 | |
| 174 | Q | A | 0.8532 | |
| 175 | L | A | 1.4428 | |
| 176 | V | A | 0.8320 | |
| 177 | N | A | -0.3152 | |
| 178 | S | A | 0.0187 | |
| 179 | V | A | 0.4323 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3871 | |
| 182 | D | A | 0.0845 | |
| 183 | G | A | -0.1599 | |
| 184 | D | A | -0.5315 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1008 | |
| 190 | F | A | 0.0651 | |
| 191 | G | A | -0.1037 | |
| 192 | N | A | -0.2634 | |
| 193 | M | A | -0.1223 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3636 | |
| 197 | E | A | -2.5809 | |
| 198 | L | A | -1.1995 | |
| 199 | Q | A | -2.5401 | |
| 200 | Q | A | -3.3080 | |
| 201 | D | A | -3.5796 | |
| 202 | R | A | -3.3155 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2117 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3383 | |
| 211 | S | A | -1.8755 | |
| 212 | T | A | -1.4153 | |
| 213 | R | A | -2.0533 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1609 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3676 | |
| 220 | L | A | 0.5970 | |
| 221 | K | A | -1.1296 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8214 | |
| 224 | N | A | -1.5032 | |
| 225 | E | A | -1.2456 | |
| 226 | A | A | -0.5993 | |
| 227 | Y | A | -0.3645 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6777 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0754 | |
| 234 | F | A | 0.2597 | |
| 235 | G | A | -0.8169 | |
| 236 | R | A | -2.5936 | |
| 237 | R | A | -2.8643 | |
| 238 | E | A | -2.1486 | |
| 239 | Q | A | -0.2184 | |
| 240 | V | A | 1.3893 | |
| 241 | Y | A | 1.1070 | |
| 242 | A | A | 0.2544 | |
| 243 | R | A | -0.8546 | |
| 244 | H | A | -0.8864 | |
| 245 | F | A | 0.0803 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5477 | |
| 249 | C | A | -0.9535 | |
| 250 | G | A | -0.9068 | |
| 251 | P | A | -0.8923 | |
| 252 | D | A | -1.3522 | |
| 253 | G | A | -1.2862 | |
| 254 | H | A | -1.4612 | |
| 255 | P | A | -1.2557 | |
| 256 | L | A | -0.0500 | |
| 257 | P | A | -0.8042 | |
| 258 | D | A | -2.0808 | |
| 259 | A | A | -0.8522 | |
| 260 | P | A | -0.9892 | |
| 261 | P | A | -0.7155 | |
| 262 | P | A | -0.1715 | |
| 263 | S | A | 0.0172 | |
| 264 | P | A | 0.7096 | |
| 265 | L | A | 1.7479 | |
| 266 | Y | A | 1.1834 | |
| 267 | V | A | 1.1092 | |
| 268 | R | A | -0.8196 | |
| 269 | P | A | 0.0909 | |
| 270 | P | A | 0.1771 | |
| 271 | P | A | 0.3785 | |
| 272 | W | A | 1.1128 | |
| 273 | S | A | 0.7420 | |
| 274 | P | A | 0.6074 | |
| 275 | Y | A | 1.1461 | |
| 276 | A | A | 1.0782 | |
| 277 | V | A | 1.6870 | |
| 278 | P | A | 0.7048 | |
| 279 | P | A | 0.0219 | |
| 280 | P | A | -0.4899 | |
| 281 | T | A | -0.5490 | |
| 282 | D | A | -0.9853 | |
| 283 | Y | A | 0.8232 | |
| 284 | F | A | 0.6687 | |
| 285 | G | A | 0.2549 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8973 | |
| 291 | L | A | 1.5906 | |
| 292 | V | A | 0.6099 | |
| 293 | S | A | -0.1540 | |
| 294 | S | A | -0.9520 | |
| 295 | D | A | -1.8441 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0988 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6160 | |
| 301 | R | A | -1.8368 | |
| 302 | P | A | -0.9678 | |
| 303 | F | A | -0.1858 | |
| 304 | W | A | -0.5660 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0840 | |
| 307 | R | A | -2.8309 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2457 | |
| 310 | G | A | -1.2212 | |
| 311 | N | A | -1.2592 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7956 | |
| 319 | N | A | -0.9230 | |
| 320 | E | A | -1.0283 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3402 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1145 | |
| 333 | N | A | 0.5258 | |
| 334 | F | A | 1.7272 | |
| 335 | T | A | 0.8519 | |
| 336 | I | A | 0.3901 | |
| 337 | S | A | -1.0848 | |
| 338 | Q | A | -1.9103 | |
| 339 | Q | A | -1.6222 | |
| 340 | L | A | 0.2336 | |
| 341 | S | A | 0.0201 | |
| 342 | T | A | -0.1691 | |
| 343 | P | A | -0.4730 | |
| 344 | A | A | -0.1758 | |
| 345 | P | A | -0.0373 | |
| 346 | N | A | -0.2911 | |
| 347 | V | A | 1.5115 | |
| 348 | Y | A | 1.3625 | |
| 349 | D | A | -0.1345 | |
| 350 | P | A | -0.7631 | |
| 351 | S | A | -0.6042 | |
| 352 | N | A | -0.4641 | |
| 353 | F | A | -1.1770 | |
| 354 | K | A | -2.0660 | |
| 355 | N | A | -1.8580 | |
| 356 | Y | A | -0.1488 | |
| 357 | L | A | 0.6310 | |
| 358 | R | A | 0.9591 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3704 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0897 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0518 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6861 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3045 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3121 | |
| 376 | L | A | -1.7102 | |
| 377 | D | A | -1.9959 | |
| 378 | P | A | -1.0409 | |
| 379 | G | A | -1.0140 | |
| 380 | V | A | -0.9331 | |
| 381 | L | A | -0.5344 | |
| 382 | A | A | -0.6569 | |
| 383 | H | A | -0.8009 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4105 | |
| 386 | T | A | -0.5475 | |
| 387 | M | A | -0.2944 | |
| 388 | N | A | -0.8646 | |
| 389 | P | A | -1.2397 | |
| 390 | T | A | -1.4239 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4293 | |
| 393 | E | A | -2.7622 | |
| 394 | N | A | -2.3442 | |
| 395 | W | A | -1.3619 | |
| 396 | N | A | -1.1361 | |
| 397 | L | A | -0.2004 | |
| 398 | G | A | 0.5261 | |
| 399 | F | A | 2.4072 | |
| 400 | V | A | 1.8237 | |
| 401 | P | A | 0.0516 | |
| 402 | P | A | -1.8268 | |
| 403 | K | A | -3.2948 | |
| 404 | E | A | -3.7406 | |
| 405 | R | A | -3.8358 | |
| 406 | E | A | -3.7525 | |
| 407 | D | A | -2.8611 | |
| 408 | P | A | -1.7576 | |
| 409 | Y | A | -0.9837 | |
| 410 | K | A | -2.1093 | |
| 411 | G | A | -0.6320 | |
| 412 | L | A | 0.6830 | |
| 413 | I | A | 1.5959 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3797 | |
| 416 | E | A | -1.6626 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9415 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0500 | |
| 421 | E | A | -2.7769 | |
| 422 | R | A | -2.5579 | |
| 423 | F | A | -1.2730 | |
| 424 | S | A | -1.4638 | |
| 425 | Q | A | -1.7311 | |
| 426 | D | A | -2.9024 | |
| 427 | L | A | -1.9930 | |
| 428 | D | A | -2.7846 | |
| 429 | Q | A | -2.6219 | |
| 430 | F | A | -1.4255 | |
| 431 | A | A | -0.9050 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6148 | |
| 435 | K | A | -0.7282 | |
| 436 | F | A | 0.1340 | |
| 437 | L | A | 1.0173 | |
| 438 | Y | A | 0.8178 | |
| 439 | Q | A | -0.2828 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine