| Chain sequence(s) |
C: KRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLD
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 8 | K | C | -2.5351 | |
| 9 | R | C | -2.0362 | |
| 10 | Q | C | -1.1154 | |
| 11 | V | C | -0.7976 | |
| 12 | S | C | -1.2139 | |
| 13 | G | C | -1.6461 | |
| 14 | D | C | -2.5282 | |
| 15 | E | C | -2.1746 | |
| 16 | A | C | -1.0004 | |
| 17 | Y | C | 0.2834 | |
| 18 | L | C | 0.2034 | |
| 19 | E | C | -1.2403 | |
| 20 | A | C | -0.0747 | |
| 21 | A | C | 0.2025 | |
| 22 | P | C | 0.1308 | |
| 23 | L | C | 1.2741 | |
| 24 | A | C | 0.2021 | |
| 25 | E | C | -0.9307 | |
| 26 | L | C | 0.2452 | |
| 27 | H | C | -0.2272 | |
| 28 | A | C | 0.6741 | |
| 29 | P | C | 0.2991 | |
| 30 | A | C | 0.2225 | |
| 31 | G | C | 0.4386 | |
| 32 | M | C | 1.8054 | |
| 33 | I | C | 2.7881 | |
| 34 | L | C | 2.2978 | |
| 35 | P | C | 1.2737 | |
| 36 | V | C | 1.9011 | |
| 37 | T | C | 0.5070 | |
| 38 | S | C | -0.0965 | |
| 39 | G | C | -0.7347 | |
| 40 | D | C | -1.1429 | |
| 41 | Y | C | 0.7672 | |
| 42 | A | C | 1.1218 | |
| 43 | I | C | 2.5787 | |
| 44 | P | C | 1.5791 | |
| 45 | V | C | 1.7930 | |
| 46 | T | C | 0.2647 | |
| 47 | N | C | -1.2917 | |
| 48 | G | C | -0.9447 | |
| 49 | S | C | -0.7048 | |
| 50 | G | C | -0.2563 | |
| 51 | A | C | 0.6557 | |
| 52 | V | C | 1.4890 | |
| 53 | G | C | 0.0874 | |
| 54 | K | C | -1.1464 | |
| 55 | A | C | 0.4110 | |
| 56 | L | C | 1.0336 | |
| 57 | D | C | 0.0649 | |
| 58 | I | C | 0.6828 | |
| 59 | R | C | -0.0953 | |
| 60 | P | C | -0.4238 | |
| 61 | P | C | -0.4823 | |
| 62 | A | C | -0.5183 | |
| 63 | Q | C | -1.1211 | |
| 64 | P | C | 0.0000 | |
| 65 | L | C | 0.2251 | |
| 66 | A | C | 0.0000 | |
| 67 | L | C | 2.2079 | |
| 68 | V | C | 1.8212 | |
| 69 | S | C | 0.3301 | |
| 70 | G | C | 0.1435 | |
| 71 | A | C | -0.4903 | |
| 72 | R | C | -1.7906 | |
| 73 | T | C | -0.9995 | |
| 74 | Q | C | -1.3842 | |
| 75 | F | C | -0.6101 | |
| 76 | T | C | -0.3657 | |
| 77 | G | C | -0.4454 | |
| 78 | D | C | -0.2864 | |
| 79 | T | C | -0.2504 | |
| 80 | A | C | 0.0000 | |
| 81 | S | C | 0.3046 | |
| 82 | L | C | 0.0000 | |
| 83 | L | C | 0.3652 | |
| 84 | V | C | -0.6373 | |
| 85 | E | C | -2.1816 | |
| 86 | N | C | -2.7415 | |
| 87 | G | C | -2.4423 | |
| 88 | R | C | -2.9303 | |
| 89 | G | C | 0.0000 | |
| 90 | N | C | -2.0410 | |
| 91 | T | C | -1.2501 | |
| 92 | L | C | 0.0000 | |
| 93 | W | C | -0.0265 | |
| 94 | P | C | -0.2769 | |
| 95 | Q | C | -0.3933 | |
| 96 | V | C | 0.0000 | |
| 97 | V | C | 0.2360 | |
| 98 | S | C | -0.3194 | |
| 99 | V | C | 0.0000 | |
| 100 | L | C | 0.0000 | |
| 101 | Q | C | -0.7481 | |
| 102 | A | C | -0.6615 | |
| 103 | K | C | -1.6870 | |
| 104 | N | C | -0.5113 | |
| 105 | Y | C | 0.7415 | |
| 106 | T | C | 1.1184 | |
| 107 | I | C | 1.4210 | |
| 108 | T | C | 0.0000 | |
| 109 | Q | C | -1.5133 | |
| 110 | R | C | -2.8230 | |
| 111 | D | C | -2.8024 | |
| 112 | D | C | -2.7008 | |
| 113 | A | C | -1.4765 | |
| 114 | G | C | -1.4539 | |
| 115 | Q | C | -1.6216 | |
| 116 | T | C | -1.1030 | |
| 117 | L | C | -0.4480 | |
| 118 | T | C | 0.0000 | |
| 119 | T | C | 0.0000 | |
| 120 | D | C | 0.0000 | |
| 121 | W | C | 0.8692 | |
| 122 | V | C | 1.0991 | |
| 123 | Q | C | 0.6156 | |
| 124 | W | C | 0.4169 | |
| 125 | N | C | -0.6813 | |
| 126 | R | C | -2.0696 | |
| 127 | L | C | -0.9611 | |
| 128 | D | C | -2.9668 | |
| 129 | E | C | -3.0274 | |
| 130 | D | C | -3.5938 | |
| 131 | E | C | -2.9235 | |
| 132 | Q | C | -2.5116 | |
| 133 | Y | C | -1.6190 | |
| 134 | R | C | 0.0000 | |
| 135 | G | C | 0.0000 | |
| 136 | R | C | 0.0000 | |
| 137 | Y | C | 1.1291 | |
| 138 | Q | C | 0.0000 | |
| 139 | I | C | 0.8739 | |
| 140 | S | C | 0.0000 | |
| 141 | V | C | 0.6310 | |
| 142 | K | C | 0.0000 | |
| 143 | P | C | -0.5675 | |
| 144 | Q | C | -1.3007 | |
| 145 | G | C | -0.3817 | |
| 146 | Y | C | 0.4578 | |
| 147 | Q | C | -1.1541 | |
| 148 | Q | C | 0.0000 | |
| 149 | A | C | -1.3437 | |
| 150 | V | C | 0.0000 | |
| 151 | T | C | 0.0000 | |
| 152 | V | C | 0.6778 | |
| 153 | K | C | 0.0000 | |
| 154 | L | C | 0.7378 | |
| 155 | L | C | 0.0000 | |
| 156 | N | C | 0.6226 | |
| 157 | L | C | 1.3389 | |
| 158 | E | C | 0.0000 | |
| 159 | Q | C | 0.0555 | |
| 160 | A | C | 0.0000 | |
| 161 | G | C | -1.3517 | |
| 162 | K | C | -1.6971 | |
| 163 | P | C | -0.2304 | |
| 164 | V | C | 0.9679 | |
| 165 | A | C | -0.1642 | |
| 166 | D | C | -1.1478 | |
| 167 | A | C | -0.5659 | |
| 168 | A | C | -0.4058 | |
| 169 | S | C | -0.2327 | |
| 170 | M | C | -0.4193 | |
| 171 | Q | C | 0.0000 | |
| 172 | R | C | 0.0000 | |
| 173 | Y | C | -0.0276 | |
| 174 | S | C | 0.0000 | |
| 175 | T | C | 0.0000 | |
| 176 | E | C | -0.0575 | |
| 177 | M | C | 0.2683 | |
| 178 | M | C | 0.0000 | |
| 179 | N | C | 0.0000 | |
| 180 | V | C | 1.0545 | |
| 181 | I | C | 0.8098 | |
| 182 | S | C | 0.2620 | |
| 183 | A | C | 0.0000 | |
| 184 | G | C | 0.5251 | |
| 185 | L | C | -0.2588 | |
| 186 | D | C | -1.1928 |