Chain sequence(s) |
A: AAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:24) [INFO] Main: Simulation completed successfully. (00:05:26) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | 1.1464 | |
2 | A | A | 1.5893 | |
3 | Y | A | 2.6510 | |
4 | V | A | 3.5361 | |
5 | Y | A | 2.8469 | |
6 | D | A | 1.2388 | |
7 | F | A | 2.2128 | |
8 | A | A | 1.6719 | |
9 | F | A | 1.7794 | |
10 | R | A | -0.9141 | |
11 | D | A | -0.8385 | |
12 | L | A | 0.7704 | |
13 | A | A | 0.0219 | |
14 | A | A | -0.1772 | |
15 | Y | A | 0.3978 | |
16 | R | A | -0.8341 | |
17 | F | A | 0.9905 | |
18 | H | A | -0.4661 | |
19 | N | A | -0.9631 | |
20 | I | A | 0.7330 | |
21 | A | A | 0.3597 | |
22 | G | A | -0.4056 | |
23 | H | A | 0.0113 | |
24 | Y | A | 1.5332 | |
25 | A | A | 1.2326 | |
26 | A | A | 1.4261 | |
27 | Y | A | 2.3588 | |
28 | C | A | 2.3139 | |
29 | Y | A | 2.4922 | |
30 | S | A | 1.8390 | |
31 | L | A | 2.4687 | |
32 | Y | A | 2.6527 | |
33 | G | A | 1.5341 | |
34 | T | A | 1.2871 | |
35 | T | A | 1.4289 | |
36 | L | A | 2.0265 | |
37 | A | A | 1.0623 | |
38 | A | A | 1.4332 | |
39 | Y | A | 1.8766 | |
40 | K | A | 0.4486 | |
41 | T | A | 0.9659 | |
42 | V | A | 2.0692 | |
43 | L | A | 1.1815 | |
44 | E | A | -0.5171 | |
45 | L | A | 1.3259 | |
46 | T | A | 0.4121 | |
47 | E | A | -0.8552 | |
48 | V | A | 0.1800 | |
49 | A | A | -0.0063 | |
50 | A | A | -0.0806 | |
51 | Y | A | 0.3963 | |
52 | R | A | -0.7175 | |
53 | A | A | 0.0500 | |
54 | H | A | 0.6133 | |
55 | Y | A | 1.7984 | |
56 | N | A | 1.5391 | |
57 | I | A | 3.0850 | |
58 | V | A | 3.3692 | |
59 | T | A | 2.9467 | |
60 | F | A | 3.7702 | |
61 | A | A | 2.8702 | |
62 | A | A | 2.0137 | |
63 | Y | A | 2.3353 | |
64 | T | A | 1.8658 | |
65 | L | A | 2.4485 | |
66 | Q | A | 1.1121 | |
67 | D | A | 0.5048 | |
68 | I | A | 2.8101 | |
69 | V | A | 3.2094 | |
70 | L | A | 2.5405 | |
71 | H | A | 1.7552 | |
72 | L | A | 3.0882 | |
73 | A | A | 2.7307 | |
74 | A | A | 2.6358 | |
75 | Y | A | 3.3342 | |
76 | L | A | 3.3409 | |
77 | L | A | 3.1591 | |
78 | M | A | 3.2300 | |
79 | G | A | 2.4006 | |
80 | T | A | 2.6552 | |
81 | L | A | 3.3249 | |
82 | G | A | 2.3629 | |
83 | I | A | 3.4597 | |
84 | V | A | 3.3212 | |
85 | A | A | 2.0873 | |
86 | A | A | 1.8019 | |
87 | Y | A | 1.8807 | |
88 | L | A | 0.6452 | |
89 | P | A | -0.8160 | |
90 | A | A | -1.3329 | |
91 | R | A | -2.9257 | |
92 | R | A | -3.2562 | |
93 | A | A | -2.4282 | |
94 | E | A | -3.0604 | |
95 | P | A | -1.7715 | |
96 | Q | A | -1.0718 | |
97 | A | A | 0.0727 | |
98 | A | A | 0.7687 | |
99 | Y | A | 1.4918 | |
100 | L | A | 1.6178 | |
101 | L | A | 1.6960 | |
102 | C | A | 0.9076 | |
103 | H | A | -0.3651 | |
104 | E | A | -1.6324 | |
105 | Q | A | -1.5002 | |
106 | L | A | -0.5866 | |
107 | S | A | -2.2326 | |
108 | D | A | -3.5181 | |
109 | S | A | -2.8445 | |
110 | E | A | -3.7927 | |
111 | E | A | -4.6845 | |
112 | E | A | -4.5417 | |
113 | N | A | -3.9299 | |
114 | D | A | -3.4254 | |
115 | G | A | -2.0566 | |
116 | P | A | -1.1739 | |
117 | G | A | -1.1193 | |
118 | P | A | -1.0489 | |
119 | G | A | -1.3700 | |
120 | Q | A | -1.7293 | |
121 | S | A | -1.0259 | |
122 | T | A | -0.7419 | |
123 | H | A | -0.5818 | |
124 | V | A | 0.7013 | |
125 | D | A | -0.5412 | |
126 | I | A | 0.7517 | |
127 | R | A | -1.5826 | |
128 | T | A | -0.3683 | |
129 | L | A | 0.7377 | |
130 | E | A | -0.9322 | |
131 | D | A | -1.1044 | |
132 | L | A | 1.5303 | |
133 | L | A | 1.8608 | |
134 | M | A | 1.1469 | |
135 | G | A | 0.2537 | |
136 | P | A | -0.4060 | |
137 | G | A | -0.7914 | |
138 | P | A | -0.8772 | |
139 | G | A | -0.8724 | |
140 | T | A | -0.3712 | |
141 | P | A | -0.2300 | |
142 | T | A | 0.0109 | |
143 | L | A | 0.7288 | |
144 | H | A | -0.7351 | |
145 | E | A | -0.8778 | |
146 | Y | A | 1.0259 | |
147 | M | A | 1.6567 | |
148 | L | A | 1.5233 | |
149 | D | A | -0.1734 | |
150 | L | A | 0.2507 | |
151 | Q | A | -1.3022 | |
152 | P | A | -1.6473 | |
153 | E | A | -2.2432 | |
154 | T | A | -1.5264 | |
155 | G | A | -1.2406 | |
156 | P | A | -1.0312 | |
157 | G | A | -0.7658 | |
158 | P | A | -0.6432 | |
159 | G | A | -0.4702 | |
160 | L | A | 0.4170 | |
161 | Q | A | -0.8642 | |
162 | D | A | -0.4780 | |
163 | I | A | 2.2993 | |
164 | V | A | 2.9697 | |
165 | L | A | 2.5147 | |
166 | H | A | 0.5541 | |
167 | L | A | 0.6288 | |
168 | E | A | -1.8355 | |
169 | P | A | -1.8913 | |
170 | Q | A | -2.5577 | |
171 | N | A | -2.5368 | |
172 | E | A | -1.8652 | |
173 | I | A | 0.4138 | |
174 | P | A | -0.2076 | |
175 | G | A | -0.4712 | |
176 | P | A | -0.9246 | |
177 | G | A | -1.3650 | |
178 | P | A | -1.4570 | |
179 | G | A | -1.7434 | |
180 | A | A | -1.8895 | |
181 | E | A | -3.2684 | |
182 | K | A | -2.9104 | |
183 | L | A | -1.4380 | |
184 | R | A | -3.5047 | |
185 | H | A | -3.5206 | |
186 | L | A | -2.3236 | |
187 | N | A | -3.2578 | |
188 | E | A | -3.8138 | |
189 | K | A | -3.2352 | |
190 | R | A | -4.0822 | |
191 | R | A | -3.5880 | |
192 | F | A | -1.2962 | |
193 | H | A | -2.5639 | |
194 | N | A | -2.7804 | |
195 | G | A | -1.3175 | |
196 | P | A | -0.5810 | |
197 | G | A | -0.6977 | |
198 | P | A | -0.9910 | |
199 | G | A | -1.0383 | |
200 | L | A | -0.7607 | |
201 | D | A | -2.6235 | |
202 | K | A | -3.2330 | |
203 | K | A | -2.8890 | |
204 | Q | A | -3.2698 | |
205 | R | A | -3.3915 | |
206 | F | A | -1.8306 | |
207 | H | A | -3.0711 | |
208 | N | A | -2.7531 | |
209 | I | A | -1.3954 | |
210 | R | A | -2.3305 | |
211 | G | A | -2.1632 | |
212 | R | A | -2.1929 | |
213 | W | A | -0.7159 | |
214 | T | A | -0.7578 | |
215 | G | A | -1.2067 | |
216 | P | A | -1.0063 | |
217 | G | A | -1.2792 | |
218 | P | A | -1.0285 | |
219 | G | A | -1.7206 | |
220 | N | A | -2.1812 | |
221 | P | A | -1.7291 | |
222 | A | A | -1.3887 | |
223 | E | A | -2.4426 | |
224 | K | A | -2.3296 | |
225 | L | A | -0.8468 | |
226 | R | A | -3.0209 | |
227 | H | A | -2.8923 | |
228 | L | A | -1.4816 | |
229 | N | A | -2.7205 | |
230 | E | A | -3.6798 | |
231 | K | A | -3.2987 | |
232 | R | A | -3.7254 | |
233 | R | A | -3.0712 | |
234 | F | A | -0.7587 | |
235 | G | A | -1.3571 | |
236 | P | A | -1.1037 | |
237 | G | A | -1.2302 | |
238 | P | A | -0.8323 | |
239 | G | A | -0.9199 | |
240 | S | A | -1.2043 | |
241 | K | A | -1.6526 | |
242 | I | A | 0.4742 | |
243 | S | A | -0.7671 | |
244 | E | A | -1.4779 | |
245 | Y | A | 0.4834 | |
246 | R | A | -0.4064 | |
247 | H | A | -0.3564 | |
248 | Y | A | 1.5972 | |
249 | C | A | 1.4457 | |
250 | Y | A | 1.7939 | |
251 | S | A | 1.3838 | |
252 | L | A | 2.4215 | |
253 | Y | A | 2.1898 | |
254 | G | A | 0.5298 | |
255 | G | A | -0.1602 | |
256 | P | A | -0.7890 | |
257 | G | A | -1.0179 | |
258 | P | A | -0.8283 | |
259 | G | A | -0.7447 |