Project name: 2_i20e6_i14e7_x4e7_x11e6

Status: done

Started: 2025-08-11 18:55:04
Settings
Chain sequence(s) A: AAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:26)
Show buried residues

Minimal score value
-4.6845
Maximal score value
3.7702
Average score
-0.2299
Total score value
-59.5542

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 1.1464
2 A A 1.5893
3 Y A 2.6510
4 V A 3.5361
5 Y A 2.8469
6 D A 1.2388
7 F A 2.2128
8 A A 1.6719
9 F A 1.7794
10 R A -0.9141
11 D A -0.8385
12 L A 0.7704
13 A A 0.0219
14 A A -0.1772
15 Y A 0.3978
16 R A -0.8341
17 F A 0.9905
18 H A -0.4661
19 N A -0.9631
20 I A 0.7330
21 A A 0.3597
22 G A -0.4056
23 H A 0.0113
24 Y A 1.5332
25 A A 1.2326
26 A A 1.4261
27 Y A 2.3588
28 C A 2.3139
29 Y A 2.4922
30 S A 1.8390
31 L A 2.4687
32 Y A 2.6527
33 G A 1.5341
34 T A 1.2871
35 T A 1.4289
36 L A 2.0265
37 A A 1.0623
38 A A 1.4332
39 Y A 1.8766
40 K A 0.4486
41 T A 0.9659
42 V A 2.0692
43 L A 1.1815
44 E A -0.5171
45 L A 1.3259
46 T A 0.4121
47 E A -0.8552
48 V A 0.1800
49 A A -0.0063
50 A A -0.0806
51 Y A 0.3963
52 R A -0.7175
53 A A 0.0500
54 H A 0.6133
55 Y A 1.7984
56 N A 1.5391
57 I A 3.0850
58 V A 3.3692
59 T A 2.9467
60 F A 3.7702
61 A A 2.8702
62 A A 2.0137
63 Y A 2.3353
64 T A 1.8658
65 L A 2.4485
66 Q A 1.1121
67 D A 0.5048
68 I A 2.8101
69 V A 3.2094
70 L A 2.5405
71 H A 1.7552
72 L A 3.0882
73 A A 2.7307
74 A A 2.6358
75 Y A 3.3342
76 L A 3.3409
77 L A 3.1591
78 M A 3.2300
79 G A 2.4006
80 T A 2.6552
81 L A 3.3249
82 G A 2.3629
83 I A 3.4597
84 V A 3.3212
85 A A 2.0873
86 A A 1.8019
87 Y A 1.8807
88 L A 0.6452
89 P A -0.8160
90 A A -1.3329
91 R A -2.9257
92 R A -3.2562
93 A A -2.4282
94 E A -3.0604
95 P A -1.7715
96 Q A -1.0718
97 A A 0.0727
98 A A 0.7687
99 Y A 1.4918
100 L A 1.6178
101 L A 1.6960
102 C A 0.9076
103 H A -0.3651
104 E A -1.6324
105 Q A -1.5002
106 L A -0.5866
107 S A -2.2326
108 D A -3.5181
109 S A -2.8445
110 E A -3.7927
111 E A -4.6845
112 E A -4.5417
113 N A -3.9299
114 D A -3.4254
115 G A -2.0566
116 P A -1.1739
117 G A -1.1193
118 P A -1.0489
119 G A -1.3700
120 Q A -1.7293
121 S A -1.0259
122 T A -0.7419
123 H A -0.5818
124 V A 0.7013
125 D A -0.5412
126 I A 0.7517
127 R A -1.5826
128 T A -0.3683
129 L A 0.7377
130 E A -0.9322
131 D A -1.1044
132 L A 1.5303
133 L A 1.8608
134 M A 1.1469
135 G A 0.2537
136 P A -0.4060
137 G A -0.7914
138 P A -0.8772
139 G A -0.8724
140 T A -0.3712
141 P A -0.2300
142 T A 0.0109
143 L A 0.7288
144 H A -0.7351
145 E A -0.8778
146 Y A 1.0259
147 M A 1.6567
148 L A 1.5233
149 D A -0.1734
150 L A 0.2507
151 Q A -1.3022
152 P A -1.6473
153 E A -2.2432
154 T A -1.5264
155 G A -1.2406
156 P A -1.0312
157 G A -0.7658
158 P A -0.6432
159 G A -0.4702
160 L A 0.4170
161 Q A -0.8642
162 D A -0.4780
163 I A 2.2993
164 V A 2.9697
165 L A 2.5147
166 H A 0.5541
167 L A 0.6288
168 E A -1.8355
169 P A -1.8913
170 Q A -2.5577
171 N A -2.5368
172 E A -1.8652
173 I A 0.4138
174 P A -0.2076
175 G A -0.4712
176 P A -0.9246
177 G A -1.3650
178 P A -1.4570
179 G A -1.7434
180 A A -1.8895
181 E A -3.2684
182 K A -2.9104
183 L A -1.4380
184 R A -3.5047
185 H A -3.5206
186 L A -2.3236
187 N A -3.2578
188 E A -3.8138
189 K A -3.2352
190 R A -4.0822
191 R A -3.5880
192 F A -1.2962
193 H A -2.5639
194 N A -2.7804
195 G A -1.3175
196 P A -0.5810
197 G A -0.6977
198 P A -0.9910
199 G A -1.0383
200 L A -0.7607
201 D A -2.6235
202 K A -3.2330
203 K A -2.8890
204 Q A -3.2698
205 R A -3.3915
206 F A -1.8306
207 H A -3.0711
208 N A -2.7531
209 I A -1.3954
210 R A -2.3305
211 G A -2.1632
212 R A -2.1929
213 W A -0.7159
214 T A -0.7578
215 G A -1.2067
216 P A -1.0063
217 G A -1.2792
218 P A -1.0285
219 G A -1.7206
220 N A -2.1812
221 P A -1.7291
222 A A -1.3887
223 E A -2.4426
224 K A -2.3296
225 L A -0.8468
226 R A -3.0209
227 H A -2.8923
228 L A -1.4816
229 N A -2.7205
230 E A -3.6798
231 K A -3.2987
232 R A -3.7254
233 R A -3.0712
234 F A -0.7587
235 G A -1.3571
236 P A -1.1037
237 G A -1.2302
238 P A -0.8323
239 G A -0.9199
240 S A -1.2043
241 K A -1.6526
242 I A 0.4742
243 S A -0.7671
244 E A -1.4779
245 Y A 0.4834
246 R A -0.4064
247 H A -0.3564
248 Y A 1.5972
249 C A 1.4457
250 Y A 1.7939
251 S A 1.3838
252 L A 2.4215
253 Y A 2.1898
254 G A 0.5298
255 G A -0.1602
256 P A -0.7890
257 G A -1.0179
258 P A -0.8283
259 G A -0.7447
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Laboratory of Theory of Biopolymers 2018