| Chain sequence(s) |
H: QVQLVESGGGLVQAGGSVRLSCAASGRTFITYTMGWFRQAPGKERDFVAGISWSGSSTHYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAQRGATVRVDGPYDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26)
[INFO] Main: Simulation completed successfully. (00:01:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.9931 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.6213 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.6630 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4836 | |
| 8 | G | H | -0.9647 | |
| 9 | G | H | -0.5308 | |
| 11 | G | H | 0.1903 | |
| 12 | L | H | 1.1506 | |
| 13 | V | H | 0.0720 | |
| 14 | Q | H | -1.2438 | |
| 15 | A | H | -1.6132 | |
| 16 | G | H | -1.3368 | |
| 17 | G | H | -0.9271 | |
| 18 | S | H | -1.0320 | |
| 19 | V | H | -0.4967 | |
| 20 | R | H | -1.2412 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2655 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.3025 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.4864 | |
| 27 | G | H | -2.1519 | |
| 28 | R | H | -2.3526 | |
| 29 | T | H | -1.1749 | |
| 30 | F | H | 0.0000 | |
| 35 | I | H | 0.5570 | |
| 36 | T | H | 0.0247 | |
| 37 | Y | H | -0.1029 | |
| 38 | T | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | -1.5104 | |
| 44 | Q | H | -2.2284 | |
| 45 | A | H | -1.9977 | |
| 46 | P | H | -1.3120 | |
| 47 | G | H | -1.8923 | |
| 48 | K | H | -3.4547 | |
| 49 | E | H | -3.7594 | |
| 50 | R | H | -3.3274 | |
| 51 | D | H | -3.4615 | |
| 52 | F | H | -1.5903 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.1768 | |
| 58 | W | H | 0.5448 | |
| 59 | S | H | -0.0105 | |
| 62 | G | H | -0.3110 | |
| 63 | S | H | -0.3668 | |
| 64 | S | H | -0.3763 | |
| 65 | T | H | -0.2082 | |
| 66 | H | H | -0.8172 | |
| 67 | Y | H | -1.2211 | |
| 68 | A | H | -1.8237 | |
| 69 | D | H | -2.5893 | |
| 70 | S | H | -1.8497 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.7186 | |
| 74 | G | H | -1.8071 | |
| 75 | R | H | -1.5683 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7686 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4127 | |
| 80 | R | H | -0.6355 | |
| 81 | D | H | -1.2115 | |
| 82 | N | H | -0.8645 | |
| 83 | A | H | -1.0281 | |
| 84 | K | H | -2.0109 | |
| 85 | N | H | -1.5206 | |
| 86 | T | H | -0.7104 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.3594 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.8239 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2449 | |
| 93 | S | H | -1.1925 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.3750 | |
| 96 | P | H | -1.8727 | |
| 97 | E | H | -2.3548 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7871 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.2723 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | -0.2712 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | Q | H | 0.0000 | |
| 108 | R | H | -1.9689 | |
| 109 | G | H | -0.9876 | |
| 110 | A | H | -0.4499 | |
| 111 | T | H | -0.5564 | |
| 111A | V | H | -0.4916 | |
| 112B | R | H | -1.5545 | |
| 112A | V | H | -0.1068 | |
| 112 | D | H | -2.0301 | |
| 113 | G | H | -1.2091 | |
| 114 | P | H | -0.9687 | |
| 115 | Y | H | 0.0000 | |
| 116 | D | H | -1.1877 | |
| 117 | Y | H | -0.6138 | |
| 118 | W | H | 0.0580 | |
| 119 | G | H | -0.1866 | |
| 120 | Q | H | -0.8930 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.5079 | |
| 123 | Q | H | -0.5101 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1694 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8041 | |
| 128 | S | H | -0.9200 |