Project name: 12.P2E2.pdb

Status: done

Started: 2026-03-19 12:34:07
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Chain sequence(s) H: QVQLVESGGGLVQAGGSVRLSCAASGRTFITYTMGWFRQAPGKERDFVAGISWSGSSTHYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAQRGATVRVDGPYDYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:27)
Show buried residues

Minimal score value
-3.7594
Maximal score value
1.1506
Average score
-0.7717
Total score value
-94.9185

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.9931
2 V H 0.0000
3 Q H -1.6213
4 L H 0.0000
5 V H 0.6630
6 E H 0.0000
7 S H -0.4836
8 G H -0.9647
9 G H -0.5308
11 G H 0.1903
12 L H 1.1506
13 V H 0.0720
14 Q H -1.2438
15 A H -1.6132
16 G H -1.3368
17 G H -0.9271
18 S H -1.0320
19 V H -0.4967
20 R H -1.2412
21 L H 0.0000
22 S H -0.2655
23 C H 0.0000
24 A H -0.3025
25 A H 0.0000
26 S H -1.4864
27 G H -2.1519
28 R H -2.3526
29 T H -1.1749
30 F H 0.0000
35 I H 0.5570
36 T H 0.0247
37 Y H -0.1029
38 T H 0.0000
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H -1.5104
44 Q H -2.2284
45 A H -1.9977
46 P H -1.3120
47 G H -1.8923
48 K H -3.4547
49 E H -3.7594
50 R H -3.3274
51 D H -3.4615
52 F H -1.5903
53 V H 0.0000
54 A H 0.0000
55 G H 0.0000
56 I H 0.0000
57 S H 0.1768
58 W H 0.5448
59 S H -0.0105
62 G H -0.3110
63 S H -0.3668
64 S H -0.3763
65 T H -0.2082
66 H H -0.8172
67 Y H -1.2211
68 A H -1.8237
69 D H -2.5893
70 S H -1.8497
71 V H 0.0000
72 K H -2.7186
74 G H -1.8071
75 R H -1.5683
76 F H 0.0000
77 T H -0.7686
78 I H 0.0000
79 S H -0.4127
80 R H -0.6355
81 D H -1.2115
82 N H -0.8645
83 A H -1.0281
84 K H -2.0109
85 N H -1.5206
86 T H -0.7104
87 V H 0.0000
88 Y H -0.3594
89 L H 0.0000
90 Q H -0.8239
91 M H 0.0000
92 N H -1.2449
93 S H -1.1925
94 L H 0.0000
95 K H -2.3750
96 P H -1.8727
97 E H -2.3548
98 D H 0.0000
99 T H -0.7871
100 A H 0.0000
101 V H -0.2723
102 Y H 0.0000
103 Y H -0.2712
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 Q H 0.0000
108 R H -1.9689
109 G H -0.9876
110 A H -0.4499
111 T H -0.5564
111A V H -0.4916
112B R H -1.5545
112A V H -0.1068
112 D H -2.0301
113 G H -1.2091
114 P H -0.9687
115 Y H 0.0000
116 D H -1.1877
117 Y H -0.6138
118 W H 0.0580
119 G H -0.1866
120 Q H -0.8930
121 G H 0.0000
122 T H -0.5079
123 Q H -0.5101
124 V H 0.0000
125 T H -0.1694
126 V H 0.0000
127 S H -0.8041
128 S H -0.9200
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Laboratory of Theory of Biopolymers 2018