| Chain sequence(s) |
A: ALRPLYIDFKRDLGWKWIHEPKGYNANFAGANDEGLEVSQDLEPLTILYYIGKTPKIEQLSNMIVKSK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:38)
[INFO] Main: Simulation completed successfully. (00:00:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.2517 | |
| 2 | L | A | -0.3414 | |
| 3 | R | A | -1.4073 | |
| 4 | P | A | -0.5113 | |
| 5 | L | A | 0.6870 | |
| 6 | Y | A | 0.7982 | |
| 7 | I | A | -0.4151 | |
| 8 | D | A | 0.0000 | |
| 9 | F | A | 0.0000 | |
| 10 | K | A | -3.7024 | |
| 11 | R | A | -3.7402 | |
| 12 | D | A | -2.6350 | |
| 13 | L | A | -1.3249 | |
| 14 | G | A | -1.7887 | |
| 15 | W | A | -1.5918 | |
| 16 | K | A | -2.1912 | |
| 17 | W | A | -0.0216 | |
| 18 | I | A | 0.0000 | |
| 19 | H | A | -1.7082 | |
| 20 | E | A | -1.9261 | |
| 21 | P | A | -1.8895 | |
| 22 | K | A | -3.0518 | |
| 23 | G | A | -1.6639 | |
| 24 | Y | A | -0.2888 | |
| 25 | N | A | -0.1525 | |
| 26 | A | A | 0.0000 | |
| 27 | N | A | -0.1584 | |
| 28 | F | A | 0.3541 | |
| 29 | A | A | -0.2593 | |
| 30 | G | A | -0.9466 | |
| 31 | A | A | -1.3121 | |
| 32 | N | A | -2.5880 | |
| 33 | D | A | -3.1963 | |
| 34 | E | A | -3.0650 | |
| 35 | G | A | -1.7951 | |
| 36 | L | A | -0.4609 | |
| 37 | E | A | -1.7414 | |
| 38 | V | A | -1.0843 | |
| 39 | S | A | -1.9443 | |
| 40 | Q | A | -2.5889 | |
| 41 | D | A | -3.0213 | |
| 42 | L | A | -1.9271 | |
| 43 | E | A | -1.8351 | |
| 44 | P | A | -1.4562 | |
| 45 | L | A | 0.0000 | |
| 46 | T | A | -0.7423 | |
| 47 | I | A | 0.0000 | |
| 48 | L | A | -0.3130 | |
| 49 | Y | A | 0.3453 | |
| 50 | Y | A | 1.4450 | |
| 51 | I | A | 1.7031 | |
| 52 | G | A | -0.0545 | |
| 53 | K | A | -1.2651 | |
| 54 | T | A | -0.3500 | |
| 55 | P | A | 0.1993 | |
| 56 | K | A | 0.3517 | |
| 57 | I | A | 0.7489 | |
| 58 | E | A | -0.9519 | |
| 59 | Q | A | -1.5965 | |
| 60 | L | A | -0.9836 | |
| 61 | S | A | -1.2847 | |
| 62 | N | A | -2.0316 | |
| 63 | M | A | -1.0554 | |
| 64 | I | A | -0.7884 | |
| 65 | V | A | -1.1931 | |
| 66 | K | A | -1.9830 | |
| 67 | S | A | -1.5428 | |
| 68 | K | A | -2.4461 |