| Chain sequence(s) |
H: QVQLKQSGPGLVQPSQSLSITCTVSGFSLSNYGVHWVRQSPGKGLEWLGVIWSGGSTDYNAAFISRLSIRKGNSKSQVFFKMNSLQTDDTATYYCARGISTDQGAWFAYWGQGTLVTVSA
L: SIVMTQAPKFLLVSAGDRVTITCKASQSVSNDVAWYQQKPGQSPKLLIYYASNRYTGVPDRFTGSGYGTDFTFTISTVQAEDLAVYFCQQDYSSPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4200 | |
| 2 | V | H | -0.8051 | |
| 3 | Q | H | -1.5670 | |
| 4 | L | H | 0.0000 | |
| 5 | K | H | -2.2660 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.9662 | |
| 8 | G | H | -0.3760 | |
| 9 | P | H | -0.1695 | |
| 11 | G | H | 0.1061 | |
| 12 | L | H | 0.3569 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.6957 | |
| 15 | P | H | -1.5799 | |
| 16 | S | H | -1.5900 | |
| 17 | Q | H | -1.9646 | |
| 18 | S | H | -1.5944 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.7598 | |
| 21 | I | H | 0.0000 | |
| 22 | T | H | -0.7962 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.2015 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.0335 | |
| 27 | G | H | -0.9526 | |
| 28 | F | H | -0.5779 | |
| 29 | S | H | -0.8311 | |
| 30 | L | H | 0.0000 | |
| 35 | S | H | -1.1479 | |
| 36 | N | H | -1.4325 | |
| 37 | Y | H | -0.3993 | |
| 38 | G | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6154 | |
| 45 | S | H | -1.1533 | |
| 46 | P | H | -1.2879 | |
| 47 | G | H | -1.7569 | |
| 48 | K | H | -2.4529 | |
| 49 | G | H | -1.3593 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6507 | |
| 52 | W | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | -0.4038 | |
| 58 | S | H | -0.8718 | |
| 59 | G | H | -0.7992 | |
| 63 | G | H | -1.0679 | |
| 64 | S | H | -0.8379 | |
| 65 | T | H | -0.9408 | |
| 66 | D | H | -0.7198 | |
| 67 | Y | H | 0.2388 | |
| 68 | N | H | 0.2502 | |
| 69 | A | H | 0.5307 | |
| 70 | A | H | 0.5100 | |
| 71 | F | H | 0.0000 | |
| 72 | I | H | 1.6875 | |
| 74 | S | H | 0.5006 | |
| 75 | R | H | -0.2906 | |
| 76 | L | H | 0.0000 | |
| 77 | S | H | -0.8084 | |
| 78 | I | H | 0.0000 | |
| 79 | R | H | -2.2673 | |
| 80 | K | H | -1.7039 | |
| 81 | G | H | -1.5942 | |
| 82 | N | H | -1.9233 | |
| 83 | S | H | -1.4936 | |
| 84 | K | H | -2.1874 | |
| 85 | S | H | -1.4870 | |
| 86 | Q | H | -1.5877 | |
| 87 | V | H | 0.0000 | |
| 88 | F | H | -0.8781 | |
| 89 | F | H | 0.0000 | |
| 90 | K | H | -1.5024 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.6515 | |
| 93 | S | H | -1.4862 | |
| 94 | L | H | 0.0000 | |
| 95 | Q | H | -2.3607 | |
| 96 | T | H | -1.7075 | |
| 97 | D | H | -2.5441 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6279 | |
| 100 | A | H | 0.0000 | |
| 101 | T | H | 0.3058 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | I | H | -0.1178 | |
| 109 | S | H | -0.6509 | |
| 110 | T | H | -1.2310 | |
| 111 | D | H | -2.2210 | |
| 112A | Q | H | -1.8933 | |
| 112 | G | H | 0.0000 | |
| 113 | A | H | -0.3786 | |
| 114 | W | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | A | H | 0.2213 | |
| 117 | Y | H | 0.2896 | |
| 118 | W | H | -0.5720 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.8564 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.0479 | |
| 123 | L | H | 1.1287 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0825 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5190 | |
| 128 | A | H | -0.3183 | |
| 1 | S | L | 0.0490 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 1.2174 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.3019 | |
| 6 | Q | L | 0.0000 | |
| 7 | A | L | -0.5537 | |
| 8 | P | L | -0.4432 | |
| 9 | K | L | -1.0533 | |
| 10 | F | L | 0.9753 | |
| 11 | L | L | 1.0009 | |
| 12 | L | L | 0.9436 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.1631 | |
| 15 | A | L | -1.3375 | |
| 16 | G | L | -1.5181 | |
| 17 | D | L | -1.7907 | |
| 18 | R | L | -2.3326 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5469 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7676 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -1.4899 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.6080 | |
| 27 | Q | L | -1.2904 | |
| 28 | S | L | -0.8930 | |
| 29 | V | L | 0.0000 | |
| 36 | S | L | -0.1062 | |
| 37 | N | L | -0.0922 | |
| 38 | D | L | -0.2839 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.8508 | |
| 45 | K | L | -1.2531 | |
| 46 | P | L | -0.8875 | |
| 47 | G | L | -1.4335 | |
| 48 | Q | L | -2.0243 | |
| 49 | S | L | -1.3024 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.9858 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.3619 | |
| 56 | Y | L | -0.4827 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5596 | |
| 66 | N | L | -1.0573 | |
| 67 | R | L | -1.6652 | |
| 68 | Y | L | -0.6835 | |
| 69 | T | L | -0.5559 | |
| 70 | G | L | -0.8672 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.2451 | |
| 74 | D | L | -2.0948 | |
| 75 | R | L | 0.0000 | |
| 76 | F | L | 0.0000 | |
| 77 | T | L | -0.8434 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.3199 | |
| 80 | G | L | -0.2758 | |
| 83 | Y | L | 0.4966 | |
| 84 | G | L | -0.3546 | |
| 85 | T | L | -1.0814 | |
| 86 | D | L | -1.3864 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.4117 | |
| 89 | F | L | 0.0000 | |
| 90 | T | L | -0.4876 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3090 | |
| 93 | T | L | -1.4695 | |
| 94 | V | L | 0.0000 | |
| 95 | Q | L | -1.5946 | |
| 96 | A | L | -1.1891 | |
| 97 | E | L | -1.6902 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | 0.0540 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | 0.0810 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | D | L | -0.0631 | |
| 108 | Y | L | 0.5887 | |
| 109 | S | L | 0.2831 | |
| 114 | S | L | -0.2064 | |
| 115 | P | L | -0.2029 | |
| 116 | W | L | 0.2982 | |
| 117 | T | L | 0.3266 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0426 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.2602 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | 0.1858 | |
| 126 | I | L | -0.3670 | |
| 127 | K | L | -1.4405 |