| Chain sequence(s) |
A: GNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDPGSRNLCNIPCSALLSSDITASVNCAKKIVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:25)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 26 | G | A | -0.8097 | |
| 27 | N | A | -0.5473 | |
| 28 | W | A | 1.4134 | |
| 29 | V | A | 2.2763 | |
| 30 | C | A | 1.4637 | |
| 31 | A | A | 0.5228 | |
| 32 | A | A | 0.1760 | |
| 33 | K | A | -1.2106 | |
| 34 | F | A | 0.1885 | |
| 35 | E | A | -1.6499 | |
| 36 | S | A | -0.8347 | |
| 37 | N | A | -1.2609 | |
| 38 | F | A | 0.4726 | |
| 39 | N | A | -0.9391 | |
| 40 | T | A | -0.9592 | |
| 41 | Q | A | -1.5713 | |
| 42 | A | A | -0.8518 | |
| 43 | T | A | -1.4833 | |
| 44 | N | A | -2.6525 | |
| 45 | R | A | -3.1242 | |
| 46 | N | A | -2.9125 | |
| 47 | T | A | -2.1482 | |
| 48 | D | A | -2.8259 | |
| 49 | G | A | -2.0186 | |
| 50 | S | A | -1.5542 | |
| 51 | T | A | -1.0276 | |
| 52 | D | A | -1.3301 | |
| 53 | Y | A | 0.4906 | |
| 54 | G | A | 0.7334 | |
| 55 | I | A | 2.1742 | |
| 56 | L | A | 1.5124 | |
| 57 | Q | A | -0.0051 | |
| 58 | I | A | -0.1830 | |
| 59 | N | A | -1.9496 | |
| 60 | S | A | -1.1939 | |
| 61 | R | A | -1.7169 | |
| 62 | W | A | 0.4675 | |
| 63 | W | A | 1.0164 | |
| 64 | C | A | -0.0302 | |
| 65 | N | A | -1.6317 | |
| 66 | D | A | -2.3575 | |
| 70 | P | A | -0.9731 | |
| 71 | G | A | -1.5109 | |
| 72 | S | A | -1.9509 | |
| 73 | R | A | -2.3709 | |
| 74 | N | A | -1.1865 | |
| 75 | L | A | 0.5337 | |
| 76 | C | A | 1.0970 | |
| 77 | N | A | 0.1451 | |
| 78 | I | A | 1.2445 | |
| 79 | P | A | 0.4215 | |
| 80 | C | A | 0.8450 | |
| 81 | S | A | 0.7500 | |
| 82 | A | A | 1.1899 | |
| 83 | L | A | 2.3343 | |
| 84 | L | A | 2.1635 | |
| 85 | S | A | 0.9594 | |
| 86 | S | A | -0.1228 | |
| 87 | D | A | -1.1418 | |
| 88 | I | A | 0.8651 | |
| 89 | T | A | 0.4814 | |
| 90 | A | A | 0.9705 | |
| 91 | S | A | 0.8003 | |
| 92 | V | A | 1.3576 | |
| 93 | N | A | -0.4519 | |
| 94 | C | A | -0.1177 | |
| 95 | A | A | -1.6321 | |
| 96 | K | A | -2.1865 | |
| 97 | K | A | -1.4278 | |
| 98 | I | A | 1.6361 | |
| 99 | V | A | 2.2564 | |
| 100 | S | A | 1.1054 |