| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPLHCGADDRVSFSFDPKQTQLFIVGCEPPTGEHWDLAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFVRCGPDGHPLPAAPPPSPLYVPPPPTSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLATPAPNVYDPSYFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9429 | |
| 2 | L | A | 1.9620 | |
| 3 | P | A | 0.8394 | |
| 4 | P | A | 0.3885 | |
| 5 | T | A | 0.1292 | |
| 6 | T | A | 0.1302 | |
| 7 | P | A | 0.1928 | |
| 8 | V | A | 1.2151 | |
| 9 | A | A | 0.0909 | |
| 10 | K | A | -1.0239 | |
| 11 | V | A | -0.1614 | |
| 12 | Q | A | -1.3925 | |
| 13 | S | A | -1.5416 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3995 | |
| 16 | E | A | -2.4276 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4608 | |
| 20 | P | A | 0.1315 | |
| 21 | T | A | 0.1645 | |
| 22 | S | A | -0.0881 | |
| 23 | L | A | 0.1195 | |
| 24 | F | A | -0.0129 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2924 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9055 | |
| 31 | R | A | -2.6911 | |
| 32 | L | A | -0.8079 | |
| 33 | L | A | 1.1586 | |
| 34 | T | A | 1.3701 | |
| 35 | V | A | 1.8331 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2292 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6129 | |
| 40 | K | A | -1.6356 | |
| 41 | D | A | -0.9409 | |
| 42 | I | A | 0.8147 | |
| 43 | V | A | 0.8857 | |
| 44 | K | A | -1.4136 | |
| 45 | D | A | -2.4376 | |
| 46 | G | A | -1.4805 | |
| 47 | K | A | -1.1339 | |
| 48 | V | A | 1.3528 | |
| 49 | V | A | 1.9429 | |
| 50 | V | A | 1.2316 | |
| 51 | P | A | 0.4255 | |
| 52 | K | A | -0.6490 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1297 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3812 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2303 | |
| 70 | K | A | -1.7809 | |
| 71 | F | A | -0.6273 | |
| 72 | A | A | -0.5762 | |
| 73 | L | A | -0.8596 | |
| 74 | P | A | -1.2640 | |
| 75 | Q | A | -2.5020 | |
| 76 | K | A | -3.1039 | |
| 77 | D | A | -2.9817 | |
| 78 | F | A | -1.6579 | |
| 79 | Y | A | -1.8800 | |
| 80 | D | A | -2.6841 | |
| 81 | P | A | -2.3046 | |
| 82 | E | A | -3.0497 | |
| 83 | K | A | -3.3978 | |
| 84 | E | A | -2.4648 | |
| 85 | R | A | -1.2935 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6791 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9646 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3669 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7024 | |
| 99 | G | A | -0.5384 | |
| 100 | P | A | -0.4067 | |
| 101 | L | A | 0.0398 | |
| 102 | G | A | -0.2079 | |
| 103 | K | A | -0.5674 | |
| 104 | G | A | -0.3944 | |
| 105 | T | A | -0.3732 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1387 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3287 | |
| 110 | L | A | 0.2399 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1245 | |
| 113 | K | A | -0.4168 | |
| 114 | L | A | -0.7913 | |
| 115 | G | A | -0.9915 | |
| 116 | D | A | -1.3694 | |
| 117 | T | A | -1.0668 | |
| 118 | E | A | -1.8123 | |
| 119 | N | A | -2.2139 | |
| 120 | P | A | -1.9135 | |
| 121 | T | A | -1.5983 | |
| 122 | E | A | -2.3032 | |
| 123 | P | A | -1.0815 | |
| 124 | L | A | -0.5758 | |
| 125 | H | A | -0.7782 | |
| 126 | C | A | -0.7694 | |
| 127 | G | A | -1.2520 | |
| 128 | A | A | -1.1708 | |
| 129 | D | A | -2.1840 | |
| 130 | D | A | -1.7506 | |
| 131 | R | A | -1.1838 | |
| 132 | V | A | 0.0942 | |
| 133 | S | A | 0.1996 | |
| 134 | F | A | 0.1762 | |
| 135 | S | A | -0.0748 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5621 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1910 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.2355 | |
| 157 | D | A | 0.5824 | |
| 158 | L | A | 1.2188 | |
| 159 | A | A | 0.9916 | |
| 160 | P | A | 0.1081 | |
| 161 | P | A | 0.4624 | |
| 162 | C | A | 0.5072 | |
| 163 | P | A | -0.0014 | |
| 164 | G | A | -0.1094 | |
| 165 | L | A | 0.5334 | |
| 166 | P | A | -0.1358 | |
| 167 | P | A | -0.3500 | |
| 168 | G | A | -0.4298 | |
| 169 | A | A | -0.0343 | |
| 170 | C | A | 0.6492 | |
| 171 | P | A | 0.7643 | |
| 172 | P | A | 1.2248 | |
| 173 | I | A | 2.3776 | |
| 174 | Q | A | 1.2838 | |
| 175 | L | A | 1.5940 | |
| 176 | V | A | 0.8992 | |
| 177 | N | A | -0.2863 | |
| 178 | S | A | -0.0935 | |
| 179 | V | A | 0.4257 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3770 | |
| 182 | D | A | 0.0755 | |
| 183 | G | A | -0.1621 | |
| 184 | D | A | -0.5163 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1498 | |
| 190 | F | A | 0.0673 | |
| 191 | G | A | -0.1000 | |
| 192 | N | A | -0.2331 | |
| 193 | M | A | -0.0599 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3779 | |
| 197 | E | A | -2.6026 | |
| 198 | L | A | -1.2142 | |
| 199 | Q | A | -2.5577 | |
| 200 | Q | A | -3.3067 | |
| 201 | D | A | -3.5695 | |
| 202 | R | A | -3.3266 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2251 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3234 | |
| 211 | S | A | -1.8666 | |
| 212 | T | A | -1.3874 | |
| 213 | R | A | -1.9791 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1484 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3717 | |
| 220 | L | A | 0.6045 | |
| 221 | K | A | -1.1091 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8162 | |
| 224 | N | A | -1.5775 | |
| 225 | E | A | -1.2350 | |
| 226 | A | A | -0.6004 | |
| 227 | Y | A | -0.3596 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6727 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0786 | |
| 234 | F | A | 0.2594 | |
| 235 | G | A | -0.8119 | |
| 236 | R | A | -2.5889 | |
| 237 | R | A | -2.8362 | |
| 238 | E | A | -2.1077 | |
| 239 | Q | A | -0.1592 | |
| 240 | V | A | 1.4956 | |
| 241 | Y | A | 1.2467 | |
| 242 | A | A | 0.3688 | |
| 243 | R | A | -0.6508 | |
| 244 | H | A | -0.8217 | |
| 245 | F | A | 0.0799 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5956 | |
| 249 | C | A | -0.9212 | |
| 250 | G | A | -0.9358 | |
| 251 | P | A | -0.9261 | |
| 252 | D | A | -1.3950 | |
| 253 | G | A | -1.3104 | |
| 254 | H | A | -1.4652 | |
| 255 | P | A | -0.9711 | |
| 256 | L | A | 0.3131 | |
| 257 | P | A | 0.1378 | |
| 258 | A | A | 0.1779 | |
| 259 | A | A | 0.2933 | |
| 260 | P | A | -0.2670 | |
| 261 | P | A | -0.1354 | |
| 262 | P | A | 0.0755 | |
| 263 | S | A | 0.6735 | |
| 264 | P | A | 0.7173 | |
| 265 | L | A | 1.9733 | |
| 266 | Y | A | 1.8499 | |
| 267 | V | A | 1.9717 | |
| 268 | P | A | 1.1095 | |
| 269 | P | A | 0.6006 | |
| 270 | P | A | -0.1450 | |
| 271 | P | A | -0.0773 | |
| 272 | T | A | -0.0255 | |
| 273 | S | A | 0.2279 | |
| 274 | P | A | 0.1321 | |
| 275 | Y | A | 1.2132 | |
| 276 | A | A | 1.0401 | |
| 277 | V | A | 1.8380 | |
| 278 | P | A | 0.9538 | |
| 279 | P | A | 0.1344 | |
| 280 | P | A | -0.4097 | |
| 281 | T | A | -0.5826 | |
| 282 | D | A | -1.1136 | |
| 283 | Y | A | 0.7537 | |
| 284 | F | A | 0.6478 | |
| 285 | G | A | 0.2223 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 1.0111 | |
| 291 | L | A | 1.6307 | |
| 292 | V | A | 0.6445 | |
| 293 | S | A | -0.1580 | |
| 294 | S | A | -0.9628 | |
| 295 | D | A | -1.8422 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0964 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6437 | |
| 301 | R | A | -1.8365 | |
| 302 | P | A | -0.9681 | |
| 303 | F | A | -0.1950 | |
| 304 | W | A | -0.5679 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0902 | |
| 307 | R | A | -2.8324 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3746 | |
| 310 | G | A | -1.2188 | |
| 311 | N | A | -1.2627 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8219 | |
| 319 | N | A | -0.9293 | |
| 320 | E | A | -1.0333 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3398 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0853 | |
| 333 | N | A | 0.5359 | |
| 334 | F | A | 1.7224 | |
| 335 | T | A | 0.8463 | |
| 336 | I | A | 0.3783 | |
| 337 | S | A | -1.0052 | |
| 338 | Q | A | -1.7827 | |
| 339 | Q | A | -1.3355 | |
| 340 | L | A | 0.5829 | |
| 341 | A | A | 0.3418 | |
| 342 | T | A | -0.0979 | |
| 343 | P | A | -0.4312 | |
| 344 | A | A | -0.0058 | |
| 345 | P | A | 0.1603 | |
| 346 | N | A | -0.2620 | |
| 347 | V | A | 1.6649 | |
| 348 | Y | A | 1.6288 | |
| 349 | D | A | 0.3531 | |
| 350 | P | A | -0.3727 | |
| 351 | S | A | -0.1000 | |
| 352 | Y | A | 0.4936 | |
| 353 | F | A | -0.6891 | |
| 354 | K | A | -1.8688 | |
| 355 | N | A | -1.8602 | |
| 356 | Y | A | -0.1591 | |
| 357 | L | A | 0.6219 | |
| 358 | R | A | 0.9545 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3843 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0841 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0684 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6943 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2752 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3118 | |
| 376 | L | A | -1.7064 | |
| 377 | D | A | -1.9887 | |
| 378 | P | A | -1.0377 | |
| 379 | G | A | -1.0144 | |
| 380 | V | A | -0.9321 | |
| 381 | L | A | -0.5318 | |
| 382 | A | A | -0.6551 | |
| 383 | H | A | -0.8051 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4136 | |
| 386 | T | A | -0.5516 | |
| 387 | M | A | -0.3000 | |
| 388 | N | A | -0.8651 | |
| 389 | P | A | -1.2476 | |
| 390 | T | A | -1.4519 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4471 | |
| 393 | E | A | -2.7831 | |
| 394 | N | A | -2.4032 | |
| 395 | W | A | -1.3860 | |
| 396 | N | A | -1.1355 | |
| 397 | L | A | -0.1928 | |
| 398 | G | A | 0.5167 | |
| 399 | F | A | 2.4112 | |
| 400 | V | A | 1.8236 | |
| 401 | P | A | 0.0478 | |
| 402 | P | A | -1.8451 | |
| 403 | K | A | -3.3221 | |
| 404 | E | A | -3.7904 | |
| 405 | R | A | -3.9431 | |
| 406 | E | A | -3.8138 | |
| 407 | D | A | -2.9062 | |
| 408 | P | A | -1.7820 | |
| 409 | Y | A | -0.9979 | |
| 410 | K | A | -2.1250 | |
| 411 | G | A | -0.6436 | |
| 412 | L | A | 0.6665 | |
| 413 | I | A | 1.5889 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3738 | |
| 416 | E | A | -1.6464 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9365 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0520 | |
| 421 | E | A | -2.7888 | |
| 422 | R | A | -2.6430 | |
| 423 | F | A | -1.2764 | |
| 424 | S | A | -1.4419 | |
| 425 | Q | A | -1.8166 | |
| 426 | D | A | -2.8648 | |
| 427 | L | A | -1.9628 | |
| 428 | D | A | -2.7587 | |
| 429 | Q | A | -2.6026 | |
| 430 | F | A | -1.4148 | |
| 431 | A | A | -0.8895 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5608 | |
| 435 | K | A | -0.7005 | |
| 436 | F | A | 0.1477 | |
| 437 | L | A | 1.0343 | |
| 438 | Y | A | 0.8284 | |
| 439 | Q | A | -0.2715 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine