Chain sequence(s) |
H: QVQLQQSGSELVRPGASVKLSCRASGYTFTTYWMHWVKQRPGQGLEWIGNIYPHSGNTNYDERFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTRDLRGFAYWGQGTTVTVSSPKTTPPSVYPLAPAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
L: DIELTQSPAIMSASPGEKVTMTCSASSSLRYMHWYQQKSGTSPKRWIYDTYNLASGVPVRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:52) [INFO] Main: Simulation completed successfully. (00:06:56) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.0011 | |
2 | V | H | -0.4209 | |
3 | Q | H | -1.0146 | |
4 | L | H | -0.5086 | |
5 | Q | H | -1.6234 | |
6 | Q | H | -1.5610 | |
7 | S | H | -1.1909 | |
8 | G | H | -1.1828 | |
9 | S | H | -1.1666 | |
11 | E | H | -1.7335 | |
12 | L | H | -0.6258 | |
13 | V | H | -0.2762 | |
14 | R | H | -1.6942 | |
15 | P | H | -1.0357 | |
16 | G | H | -0.8896 | |
17 | A | H | -0.6981 | |
18 | S | H | -0.4743 | |
19 | V | H | -0.6508 | |
20 | K | H | -1.6411 | |
21 | L | H | 0.0000 | |
22 | S | H | -1.1929 | |
23 | C | H | 0.0000 | |
24 | R | H | -2.0970 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.5788 | |
27 | G | H | -0.0925 | |
28 | Y | H | 0.7352 | |
29 | T | H | 1.1123 | |
30 | F | H | 1.9182 | |
35 | T | H | 1.1677 | |
36 | T | H | 0.5422 | |
37 | Y | H | 0.8954 | |
38 | W | H | 0.3484 | |
39 | M | H | 0.0000 | |
40 | H | H | 0.0341 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | K | H | 0.0000 | |
44 | Q | H | 0.0000 | |
45 | R | H | -1.4843 | |
46 | P | H | -0.9999 | |
47 | G | H | -1.1093 | |
48 | Q | H | -1.1049 | |
49 | G | H | -0.8657 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.9924 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | N | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | Y | H | -0.3890 | |
58 | P | H | -0.3973 | |
59 | H | H | -1.0095 | |
62 | S | H | -1.1283 | |
63 | G | H | -1.2219 | |
64 | N | H | -1.6503 | |
65 | T | H | -0.7574 | |
66 | N | H | -0.8095 | |
67 | Y | H | -1.0081 | |
68 | D | H | -2.3604 | |
69 | E | H | -3.4660 | |
70 | R | H | -3.4614 | |
71 | F | H | 0.0000 | |
72 | K | H | -3.4968 | |
74 | S | H | -2.5255 | |
75 | K | H | -2.5731 | |
76 | A | H | 0.0000 | |
77 | T | H | -0.8854 | |
78 | L | H | 0.0000 | |
79 | T | H | -0.2130 | |
80 | V | H | -0.3304 | |
81 | D | H | -0.6430 | |
82 | T | H | -0.2611 | |
83 | S | H | -0.5040 | |
84 | S | H | -0.7672 | |
85 | S | H | -0.5015 | |
86 | T | H | -0.8274 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.4968 | |
89 | M | H | 0.0000 | |
90 | Q | H | 0.0000 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.2504 | |
93 | S | H | -0.8083 | |
94 | L | H | -0.7520 | |
95 | T | H | -0.5600 | |
96 | S | H | -0.9623 | |
97 | E | H | -1.9249 | |
98 | D | H | 0.0000 | |
99 | S | H | -0.7495 | |
100 | A | H | 0.0000 | |
101 | V | H | -0.3395 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | T | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | D | H | -0.0995 | |
108 | L | H | -0.2043 | |
109 | R | H | -1.5964 | |
114 | G | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | A | H | -0.2094 | |
117 | Y | H | 0.4881 | |
118 | W | H | -0.2120 | |
119 | G | H | -0.9344 | |
120 | Q | H | -1.3131 | |
121 | G | H | -0.9283 | |
122 | T | H | 0.0000 | |
123 | T | H | -0.6547 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.6210 | |
126 | V | H | -0.3669 | |
127 | S | H | -0.6621 | |
128 | S | H | -0.8202 | |
129 | P | H | -1.2382 | |
130 | K | H | -1.7464 | |
131 | T | H | -0.8593 | |
132 | T | H | -0.5128 | |
133 | P | H | -0.7490 | |
134 | P | H | 0.0000 | |
135 | S | H | -0.5715 | |
136 | V | H | 0.0000 | |
137 | Y | H | -0.6149 | |
138 | P | H | -0.5429 | |
139 | L | H | 0.0000 | |
140 | A | H | -0.0406 | |
141 | P | H | -0.2270 | |
142 | A | H | -0.6478 | |
143 | A | H | 0.2581 | |
144 | A | H | 0.3505 | |
145 | S | H | 0.3101 | |
146 | M | H | 1.0089 | |
147 | V | H | 0.7271 | |
148 | T | H | 0.3278 | |
149 | L | H | 0.0000 | |
150 | G | H | 0.0000 | |
151 | C | H | 0.0000 | |
152 | L | H | 0.0000 | |
153 | V | H | 0.0000 | |
154 | K | H | -0.3801 | |
155 | G | H | -0.2532 | |
156 | Y | H | 0.0000 | |
157 | F | H | -0.2944 | |
158 | P | H | 0.0000 | |
159 | E | H | -1.0269 | |
160 | P | H | -0.5404 | |
161 | V | H | 0.3174 | |
162 | T | H | 0.2444 | |
163 | V | H | 0.6077 | |
164 | T | H | -0.1002 | |
165 | W | H | 0.0000 | |
166 | N | H | -0.8894 | |
167 | S | H | -0.5447 | |
168 | G | H | -0.7264 | |
169 | S | H | -0.4574 | |
170 | L | H | -0.0356 | |
171 | S | H | -0.2968 | |
172 | S | H | -0.2762 | |
173 | G | H | -0.1277 | |
174 | V | H | 0.1453 | |
175 | H | H | -0.5618 | |
176 | T | H | -0.3034 | |
177 | F | H | 0.0000 | |
178 | P | H | 0.0646 | |
179 | A | H | 0.7465 | |
180 | V | H | 1.4106 | |
181 | L | H | 1.2943 | |
182 | Q | H | -0.0062 | |
183 | S | H | -0.8053 | |
184 | D | H | -1.2125 | |
185 | L | H | -0.0557 | |
186 | Y | H | 0.4905 | |
187 | T | H | 0.0000 | |
188 | L | H | 0.0000 | |
189 | S | H | 0.0000 | |
190 | S | H | 0.0000 | |
191 | S | H | 0.0301 | |
192 | V | H | 0.0000 | |
193 | T | H | 0.2164 | |
194 | V | H | 0.0000 | |
195 | P | H | 0.2750 | |
196 | S | H | 0.0494 | |
197 | S | H | -0.4791 | |
198 | T | H | -0.6958 | |
199 | W | H | -0.2853 | |
200 | P | H | -0.5405 | |
201 | S | H | -1.0797 | |
202 | E | H | -1.8355 | |
203 | T | H | -1.1647 | |
204 | V | H | 0.0000 | |
205 | T | H | -1.4703 | |
206 | C | H | 0.0000 | |
207 | N | H | -1.4541 | |
208 | V | H | 0.0000 | |
209 | A | H | -0.8057 | |
210 | H | H | 0.0000 | |
211 | P | H | -0.5498 | |
212 | A | H | -0.5646 | |
213 | S | H | -0.6528 | |
214 | S | H | -0.7560 | |
215 | T | H | -1.0128 | |
216 | K | H | -2.1647 | |
217 | V | H | -1.7130 | |
218 | D | H | -2.9618 | |
219 | K | H | -2.3921 | |
220 | K | H | -2.1924 | |
221 | I | H | 0.0000 | |
222 | V | H | 0.4927 | |
223 | P | H | -0.1465 | |
224 | R | H | -1.3501 | |
1 | D | L | -1.0907 | |
2 | I | L | -0.0189 | |
3 | E | L | -1.4271 | |
4 | L | L | 0.0000 | |
5 | T | L | -0.6140 | |
6 | Q | L | -0.4038 | |
7 | S | L | -0.1439 | |
8 | P | L | 0.3049 | |
9 | A | L | 0.7843 | |
10 | I | L | 1.7958 | |
11 | M | L | 0.8429 | |
12 | S | L | -0.1087 | |
13 | A | L | 0.0000 | |
14 | S | L | -1.8036 | |
15 | P | L | -2.1316 | |
16 | G | L | -2.0698 | |
17 | E | L | -2.9746 | |
18 | K | L | -2.7187 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.7903 | |
21 | M | L | 0.0000 | |
22 | T | L | -0.2829 | |
23 | C | L | 0.0000 | |
24 | S | L | -0.6195 | |
25 | A | L | 0.0000 | |
26 | S | L | -0.4507 | |
27 | S | L | -0.3977 | |
28 | S | L | -0.6440 | |
29 | L | L | -0.6441 | |
37 | R | L | -1.5493 | |
38 | Y | L | 0.0565 | |
39 | M | L | 0.0000 | |
40 | H | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | -1.1252 | |
45 | K | L | -1.6363 | |
46 | S | L | -1.3152 | |
47 | G | L | -1.0569 | |
48 | T | L | -1.0112 | |
49 | S | L | 0.0000 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.2277 | |
52 | R | L | -0.4320 | |
53 | W | L | 0.0979 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.3697 | |
56 | D | L | 0.0000 | |
57 | T | L | 0.4616 | |
65 | Y | L | 1.2988 | |
66 | N | L | 0.5441 | |
67 | L | L | 1.6027 | |
68 | A | L | 0.4454 | |
69 | S | L | -0.1913 | |
70 | G | L | -0.2243 | |
71 | V | L | 0.4235 | |
72 | P | L | 0.8502 | |
74 | V | L | 1.7589 | |
75 | R | L | 0.3685 | |
76 | F | L | 0.0000 | |
77 | S | L | 0.4147 | |
78 | G | L | 0.2407 | |
79 | S | L | 0.0206 | |
80 | G | L | -0.3200 | |
83 | S | L | -0.7147 | |
84 | G | L | -0.6676 | |
85 | T | L | -0.3636 | |
86 | S | L | -0.4762 | |
87 | Y | L | 0.0000 | |
88 | S | L | -0.2956 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.5493 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.0014 | |
93 | S | L | -1.7543 | |
94 | M | L | 0.0000 | |
95 | E | L | -2.2872 | |
96 | A | L | -1.5690 | |
97 | E | L | -2.3072 | |
98 | D | L | 0.0000 | |
99 | A | L | -1.1079 | |
100 | A | L | 0.0000 | |
101 | T | L | -0.4141 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.1384 | |
107 | W | L | 0.9291 | |
108 | S | L | -0.0970 | |
109 | S | L | -0.6336 | |
114 | N | L | -1.5458 | |
115 | P | L | -0.5508 | |
116 | P | L | -0.4799 | |
117 | T | L | -0.4587 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | A | L | -0.5213 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.0689 | |
124 | L | L | 0.0000 | |
125 | E | L | 0.0000 | |
126 | L | L | 0.0000 | |
127 | K | L | -1.6564 | |
128 | R | L | -2.5945 | |
129 | A | L | -1.4654 | |
130 | D | L | -1.8949 | |
131 | A | L | -0.9879 | |
132 | A | L | -0.5875 | |
133 | P | L | -0.4074 | |
134 | T | L | -0.0527 | |
135 | V | L | 0.0000 | |
136 | S | L | -0.1186 | |
137 | I | L | 0.0000 | |
138 | F | L | 0.0000 | |
139 | P | L | -0.4101 | |
140 | P | L | -0.3245 | |
141 | S | L | -0.9416 | |
142 | S | L | -1.1798 | |
143 | E | L | -1.9119 | |
144 | Q | L | 0.0000 | |
145 | L | L | -1.0472 | |
146 | T | L | -0.9717 | |
147 | S | L | -0.9976 | |
148 | G | L | -1.2356 | |
149 | G | L | -1.0546 | |
150 | A | L | 0.0000 | |
151 | S | L | 0.0000 | |
152 | V | L | 0.0000 | |
153 | V | L | 0.0000 | |
154 | C | L | 0.0000 | |
155 | F | L | 0.0000 | |
156 | L | L | 0.0000 | |
157 | N | L | -0.7943 | |
158 | N | L | -1.3807 | |
159 | F | L | 0.0000 | |
160 | Y | L | 0.0000 | |
161 | P | L | -1.5665 | |
162 | K | L | -1.3004 | |
163 | D | L | -2.3511 | |
164 | I | L | -1.6465 | |
165 | N | L | -1.8397 | |
166 | V | L | -1.0960 | |
167 | K | L | -1.6592 | |
168 | W | L | 0.0000 | |
169 | K | L | -2.2989 | |
170 | I | L | 0.0000 | |
171 | D | L | -3.0457 | |
172 | G | L | -2.1394 | |
173 | S | L | -2.0484 | |
174 | E | L | -3.2303 | |
175 | R | L | -2.5481 | |
176 | Q | L | -2.4528 | |
177 | N | L | -2.0334 | |
178 | G | L | -0.8371 | |
179 | V | L | -0.4256 | |
180 | L | L | -0.0348 | |
181 | N | L | -0.1965 | |
182 | S | L | 0.0000 | |
183 | W | L | -0.2170 | |
184 | T | L | 0.0000 | |
185 | D | L | -2.2784 | |
186 | Q | L | -2.2173 | |
187 | D | L | -2.8464 | |
188 | S | L | -2.2678 | |
189 | K | L | -3.0058 | |
190 | D | L | -3.3456 | |
191 | S | L | -2.7001 | |
192 | T | L | -2.3015 | |
193 | Y | L | 0.0000 | |
194 | S | L | 0.0000 | |
195 | M | L | 0.0000 | |
196 | S | L | 0.0000 | |
197 | S | L | 0.0000 | |
198 | T | L | 0.0000 | |
199 | L | L | 0.0000 | |
200 | T | L | -0.1187 | |
201 | L | L | -0.8532 | |
202 | T | L | -1.4917 | |
203 | K | L | -2.7165 | |
204 | D | L | -3.3468 | |
205 | E | L | -2.6585 | |
206 | Y | L | 0.0000 | |
207 | E | L | -3.9826 | |
208 | R | L | -3.8920 | |
209 | H | L | -3.0586 | |
210 | N | L | -2.9699 | |
211 | S | L | -1.9396 | |
212 | Y | L | 0.0000 | |
213 | T | L | -0.6110 | |
214 | C | L | 0.0000 | |
215 | E | L | -0.0723 | |
216 | A | L | 0.0000 | |
217 | T | L | -1.0884 | |
218 | H | L | -1.5431 | |
219 | K | L | -2.3042 | |
220 | T | L | -1.2184 | |
221 | S | L | -0.6548 | |
222 | T | L | -0.5426 | |
223 | S | L | -0.1345 | |
224 | P | L | 0.2420 | |
225 | I | L | 1.3142 | |
226 | V | L | 1.5051 | |
227 | K | L | -0.0697 | |
228 | S | L | -0.4507 | |
229 | F | L | -1.1071 | |
230 | N | L | -2.2863 | |
231 | R | L | -2.8493 | |
232 | N | L | -2.6784 | |
233 | E | L | -2.4216 | |
234 | C | L | -0.9204 |