| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVENGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPVHDGADVRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPVGHPLPDDPPPSPLYTPPPPDSPYAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAVNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9400 | |
| 2 | L | A | 1.9622 | |
| 3 | P | A | 0.8387 | |
| 4 | P | A | 0.3792 | |
| 5 | T | A | 0.1218 | |
| 6 | T | A | 0.1259 | |
| 7 | P | A | 0.1681 | |
| 8 | V | A | 1.2131 | |
| 9 | A | A | 0.0879 | |
| 10 | K | A | -1.0190 | |
| 11 | V | A | -0.1508 | |
| 12 | Q | A | -1.4008 | |
| 13 | S | A | -1.5430 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4003 | |
| 16 | E | A | -2.4296 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4614 | |
| 20 | P | A | 0.1313 | |
| 21 | T | A | 0.1613 | |
| 22 | S | A | -0.0937 | |
| 23 | L | A | 0.0950 | |
| 24 | F | A | -0.0322 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3052 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9192 | |
| 31 | R | A | -2.7042 | |
| 32 | L | A | -0.8184 | |
| 33 | L | A | 1.1481 | |
| 34 | T | A | 1.3600 | |
| 35 | V | A | 1.8048 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2217 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1911 | |
| 40 | A | A | 0.0123 | |
| 41 | D | A | -0.2935 | |
| 42 | I | A | 1.1441 | |
| 43 | V | A | 0.9605 | |
| 44 | E | A | -1.4173 | |
| 45 | N | A | -2.0462 | |
| 46 | G | A | -1.3208 | |
| 47 | K | A | -1.1125 | |
| 48 | V | A | 1.4186 | |
| 49 | V | A | 1.7578 | |
| 50 | V | A | 1.3169 | |
| 51 | P | A | 0.6588 | |
| 52 | K | A | -0.0850 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1607 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3834 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2327 | |
| 70 | K | A | -1.7820 | |
| 71 | F | A | -0.6250 | |
| 72 | A | A | -0.5769 | |
| 73 | L | A | -0.8728 | |
| 74 | P | A | -1.2082 | |
| 75 | Q | A | -2.5100 | |
| 76 | K | A | -3.1137 | |
| 77 | D | A | -2.9988 | |
| 78 | F | A | -1.6754 | |
| 79 | Y | A | -1.9078 | |
| 80 | D | A | -2.7102 | |
| 81 | P | A | -2.3114 | |
| 82 | E | A | -3.0566 | |
| 83 | K | A | -3.4039 | |
| 84 | E | A | -2.4685 | |
| 85 | R | A | -1.2989 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6821 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0032 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.4037 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7099 | |
| 99 | G | A | -0.5343 | |
| 100 | P | A | -0.4091 | |
| 101 | L | A | 0.0342 | |
| 102 | G | A | -0.2606 | |
| 103 | K | A | -0.7495 | |
| 104 | G | A | -0.5478 | |
| 105 | S | A | -0.5533 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1144 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4128 | |
| 110 | L | A | 0.4409 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0024 | |
| 113 | K | A | -0.5451 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.1549 | |
| 116 | D | A | -1.5179 | |
| 117 | T | A | -0.9095 | |
| 118 | E | A | -1.9199 | |
| 119 | N | A | -2.2655 | |
| 120 | P | A | -1.9093 | |
| 121 | T | A | -1.5682 | |
| 122 | E | A | -2.2102 | |
| 123 | P | A | -1.0793 | |
| 124 | V | A | -0.8745 | |
| 125 | H | A | -1.3054 | |
| 126 | D | A | -2.3050 | |
| 127 | G | A | -1.7272 | |
| 128 | A | A | -1.2792 | |
| 129 | D | A | -2.0750 | |
| 130 | V | A | -1.2431 | |
| 131 | R | A | -0.7028 | |
| 132 | V | A | 0.4333 | |
| 133 | A | A | 0.4533 | |
| 134 | F | A | 0.2821 | |
| 135 | S | A | -0.1006 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7494 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2198 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5670 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1873 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1664 | |
| 157 | D | A | 0.3328 | |
| 158 | L | A | 0.7999 | |
| 159 | A | A | 0.1834 | |
| 160 | E | A | -1.4542 | |
| 161 | P | A | -0.2112 | |
| 162 | C | A | 0.1915 | |
| 163 | P | A | -0.1578 | |
| 164 | G | A | -0.0519 | |
| 165 | L | A | 0.6395 | |
| 166 | P | A | -0.0904 | |
| 167 | P | A | -0.3286 | |
| 168 | G | A | -0.4415 | |
| 169 | A | A | -0.0215 | |
| 170 | C | A | 0.6602 | |
| 171 | P | A | 0.5414 | |
| 172 | P | A | 0.8749 | |
| 173 | I | A | 2.0442 | |
| 174 | Q | A | 0.8842 | |
| 175 | L | A | 1.5099 | |
| 176 | V | A | 0.8635 | |
| 177 | N | A | -0.2928 | |
| 178 | S | A | 0.0346 | |
| 179 | V | A | 0.4342 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3859 | |
| 182 | D | A | 0.0852 | |
| 183 | G | A | -0.1554 | |
| 184 | D | A | -0.5260 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0641 | |
| 190 | F | A | 0.0413 | |
| 191 | G | A | -0.0992 | |
| 192 | N | A | -0.2450 | |
| 193 | M | A | -0.1011 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4026 | |
| 197 | E | A | -2.6317 | |
| 198 | L | A | -1.2373 | |
| 199 | Q | A | -2.5631 | |
| 200 | Q | A | -3.3127 | |
| 201 | D | A | -3.5744 | |
| 202 | R | A | -3.3289 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4570 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3625 | |
| 211 | S | A | -1.6846 | |
| 212 | T | A | -1.4204 | |
| 213 | R | A | -2.0649 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1455 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3869 | |
| 220 | L | A | 0.6161 | |
| 221 | K | A | -1.0910 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8076 | |
| 224 | N | A | -1.4880 | |
| 225 | E | A | -1.2320 | |
| 226 | A | A | -0.6020 | |
| 227 | Y | A | -0.3689 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6741 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0895 | |
| 234 | F | A | 0.2780 | |
| 235 | G | A | -0.8089 | |
| 236 | R | A | -2.4548 | |
| 237 | R | A | -2.5508 | |
| 238 | E | A | -1.5161 | |
| 239 | Q | A | 0.1862 | |
| 240 | V | A | 1.5838 | |
| 241 | Y | A | 1.1255 | |
| 242 | A | A | 0.1826 | |
| 243 | R | A | -1.0186 | |
| 244 | H | A | -0.9949 | |
| 245 | F | A | -0.0196 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.1677 | |
| 248 | R | A | -0.6179 | |
| 249 | A | A | -1.1318 | |
| 250 | G | A | -0.9023 | |
| 251 | P | A | -0.7402 | |
| 252 | V | A | -0.3988 | |
| 253 | G | A | -0.8853 | |
| 254 | H | A | -1.1524 | |
| 255 | P | A | -1.1824 | |
| 256 | L | A | -0.6869 | |
| 257 | P | A | -1.4495 | |
| 258 | D | A | -2.5734 | |
| 259 | D | A | -2.4432 | |
| 260 | P | A | -1.8796 | |
| 261 | P | A | -1.2853 | |
| 262 | P | A | -0.9929 | |
| 263 | S | A | -0.8192 | |
| 264 | P | A | 0.0031 | |
| 265 | L | A | 1.0638 | |
| 266 | Y | A | 0.4399 | |
| 267 | T | A | 0.0880 | |
| 268 | P | A | -0.0331 | |
| 269 | P | A | -0.0916 | |
| 270 | P | A | -0.8979 | |
| 271 | P | A | -0.9297 | |
| 272 | D | A | -1.7291 | |
| 273 | S | A | -0.5917 | |
| 274 | P | A | -0.1310 | |
| 275 | Y | A | 1.1389 | |
| 276 | A | A | 0.7847 | |
| 277 | V | A | 1.9394 | |
| 278 | L | A | 1.4151 | |
| 279 | P | A | 0.3664 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.1798 | |
| 282 | D | A | -0.4278 | |
| 283 | Y | A | 0.9757 | |
| 284 | F | A | 0.7179 | |
| 285 | G | A | 0.2016 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8468 | |
| 291 | L | A | 1.6191 | |
| 292 | V | A | 0.5870 | |
| 293 | S | A | -0.1521 | |
| 294 | S | A | -0.9577 | |
| 295 | D | A | -1.8403 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1261 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7050 | |
| 301 | R | A | -1.9464 | |
| 302 | P | A | -1.0008 | |
| 303 | F | A | -0.2261 | |
| 304 | W | A | -0.5853 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0922 | |
| 307 | R | A | -2.8337 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2584 | |
| 310 | G | A | -1.2214 | |
| 311 | N | A | -1.2633 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7863 | |
| 319 | N | A | -0.8423 | |
| 320 | E | A | -1.0354 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3623 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1315 | |
| 333 | N | A | 0.5148 | |
| 334 | F | A | 1.7172 | |
| 335 | T | A | 0.8585 | |
| 336 | I | A | 0.4623 | |
| 337 | S | A | -0.8264 | |
| 338 | Q | A | -1.5009 | |
| 339 | Q | A | -0.8412 | |
| 340 | L | A | 0.8742 | |
| 341 | C | A | 0.5846 | |
| 342 | T | A | 0.3047 | |
| 343 | P | A | -0.0622 | |
| 344 | A | A | 0.4839 | |
| 345 | V | A | 0.9580 | |
| 346 | N | A | 0.1089 | |
| 347 | V | A | 1.8214 | |
| 348 | Y | A | 1.6426 | |
| 349 | D | A | 0.1407 | |
| 350 | P | A | -0.3296 | |
| 351 | S | A | -0.2648 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5706 | |
| 354 | K | A | -1.6268 | |
| 355 | N | A | -1.6819 | |
| 356 | Y | A | -0.0869 | |
| 357 | L | A | 0.6240 | |
| 358 | R | A | 0.9461 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3752 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0979 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.1075 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.7031 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2776 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3165 | |
| 376 | L | A | -1.7096 | |
| 377 | D | A | -1.9811 | |
| 378 | P | A | -1.0322 | |
| 379 | G | A | -1.0121 | |
| 380 | V | A | -0.9289 | |
| 381 | L | A | -0.5278 | |
| 382 | A | A | -0.6546 | |
| 383 | H | A | -0.8068 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4170 | |
| 386 | T | A | -0.5542 | |
| 387 | M | A | -0.3024 | |
| 388 | N | A | -0.8673 | |
| 389 | P | A | -1.2399 | |
| 390 | T | A | -1.4242 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4267 | |
| 393 | E | A | -2.7657 | |
| 394 | N | A | -2.5006 | |
| 395 | W | A | -1.3583 | |
| 396 | N | A | -1.1334 | |
| 397 | L | A | -0.1945 | |
| 398 | G | A | 0.5281 | |
| 399 | F | A | 2.4076 | |
| 400 | V | A | 1.8128 | |
| 401 | P | A | 0.0441 | |
| 402 | P | A | -1.8339 | |
| 403 | K | A | -3.3017 | |
| 404 | E | A | -3.8080 | |
| 405 | R | A | -3.8140 | |
| 406 | E | A | -3.7334 | |
| 407 | D | A | -2.8374 | |
| 408 | P | A | -1.7490 | |
| 409 | Y | A | -0.9911 | |
| 410 | K | A | -2.1104 | |
| 411 | G | A | -0.6401 | |
| 412 | L | A | 0.6670 | |
| 413 | I | A | 1.5824 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4017 | |
| 416 | E | A | -1.7124 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9667 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0642 | |
| 421 | E | A | -2.8046 | |
| 422 | R | A | -2.6792 | |
| 423 | F | A | -1.3027 | |
| 424 | S | A | -1.4869 | |
| 425 | Q | A | -1.8669 | |
| 426 | D | A | -2.9063 | |
| 427 | L | A | -2.0010 | |
| 428 | D | A | -2.7813 | |
| 429 | Q | A | -2.6243 | |
| 430 | F | A | -1.4445 | |
| 431 | A | A | -0.9262 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6630 | |
| 435 | K | A | -0.7575 | |
| 436 | F | A | 0.1053 | |
| 437 | L | A | 0.9984 | |
| 438 | Y | A | 0.7994 | |
| 439 | Q | A | -0.2906 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine