| Chain sequence(s) |
A: MLLAALLAALVARTTLGADVDAVPAPTFPPPAYPYTESWQLTLTTVPSPFVGPADVYHTRPLEDPCGVVALISDPQVDRLLNEAVAHRRPTYRAHVAWYRIADGCAHLLYFIEYADCDPRQIFGRCRRRTTPMWWTPSADYMFPTEDELGLLMVAPGRFNEGQYRRLVSVDGVNILTDFMVALPEGQECPFARVDQHRTYKFGACWSDDSFKRGVDVMRFLTPFYQQPPHREVVNYWYRKNGRTLPRAYAAATPYAIDPARPSAGSPRPRPRPRPRPRPKPEPAPATPAPPGRLPEPATRDHAAGGRPTPRPPRPETPHRPFAPPAVVPSGWPQPAEPFPPRTTAAPGVSRHR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:18)
[INFO] Main: Simulation completed successfully. (00:07:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 2.4585 | |
| 2 | L | A | 3.3257 | |
| 3 | L | A | 3.4553 | |
| 4 | A | A | 2.5221 | |
| 5 | A | A | 2.5877 | |
| 6 | L | A | 3.6853 | |
| 7 | L | A | 3.6555 | |
| 8 | A | A | 2.2515 | |
| 9 | A | A | 1.8124 | |
| 10 | L | A | 2.6144 | |
| 11 | V | A | 2.6719 | |
| 12 | A | A | 0.9717 | |
| 13 | R | A | -0.3949 | |
| 14 | T | A | 0.3264 | |
| 15 | T | A | 0.3928 | |
| 16 | L | A | 0.8832 | |
| 17 | G | A | -0.3454 | |
| 18 | A | A | -0.5188 | |
| 19 | D | A | -1.5141 | |
| 20 | V | A | -0.3366 | |
| 21 | D | A | -1.7502 | |
| 22 | A | A | -0.8885 | |
| 23 | V | A | -0.6947 | |
| 24 | P | A | -0.3943 | |
| 25 | A | A | -0.0670 | |
| 26 | P | A | 0.0237 | |
| 27 | T | A | 0.0164 | |
| 28 | F | A | 0.3152 | |
| 29 | P | A | -0.0649 | |
| 30 | P | A | -0.2417 | |
| 31 | P | A | -0.2513 | |
| 32 | A | A | -0.1578 | |
| 33 | Y | A | -0.3458 | |
| 34 | P | A | -0.8627 | |
| 35 | Y | A | -1.4107 | |
| 36 | T | A | -1.5220 | |
| 37 | E | A | -1.6610 | |
| 38 | S | A | -0.3978 | |
| 39 | W | A | 0.8457 | |
| 40 | Q | A | 0.1220 | |
| 41 | L | A | 0.1295 | |
| 42 | T | A | -0.0010 | |
| 43 | L | A | 0.1538 | |
| 44 | T | A | -0.1660 | |
| 45 | T | A | -0.8644 | |
| 46 | V | A | 0.0000 | |
| 47 | P | A | -0.1573 | |
| 48 | S | A | -0.3018 | |
| 49 | P | A | 0.0000 | |
| 50 | F | A | 0.5391 | |
| 51 | V | A | 1.3983 | |
| 52 | G | A | 0.4701 | |
| 53 | P | A | -0.5426 | |
| 54 | A | A | -0.7460 | |
| 55 | D | A | -1.5918 | |
| 56 | V | A | -0.0321 | |
| 57 | Y | A | 0.3946 | |
| 58 | H | A | 0.0000 | |
| 59 | T | A | 0.0000 | |
| 60 | R | A | -1.2412 | |
| 61 | P | A | -1.3367 | |
| 62 | L | A | -1.1394 | |
| 63 | E | A | -2.1640 | |
| 64 | D | A | -1.6554 | |
| 65 | P | A | -1.3360 | |
| 66 | C | A | 0.0000 | |
| 67 | G | A | -0.6204 | |
| 68 | V | A | -0.2134 | |
| 69 | V | A | 0.0000 | |
| 70 | A | A | 0.0000 | |
| 71 | L | A | 0.0000 | |
| 72 | I | A | -0.0699 | |
| 73 | S | A | 0.0000 | |
| 74 | D | A | -2.0928 | |
| 75 | P | A | 0.0000 | |
| 76 | Q | A | -2.1720 | |
| 77 | V | A | 0.0000 | |
| 78 | D | A | -3.5687 | |
| 79 | R | A | -3.6609 | |
| 80 | L | A | -2.3149 | |
| 81 | L | A | 0.0000 | |
| 82 | N | A | -3.8421 | |
| 83 | E | A | -3.6452 | |
| 84 | A | A | 0.0000 | |
| 85 | V | A | -2.5413 | |
| 86 | A | A | -2.0161 | |
| 87 | H | A | -2.7957 | |
| 88 | R | A | -3.2313 | |
| 89 | R | A | -2.8221 | |
| 90 | P | A | -1.7208 | |
| 91 | T | A | -1.6149 | |
| 92 | Y | A | 0.0000 | |
| 93 | R | A | -1.6445 | |
| 94 | A | A | 0.0000 | |
| 95 | H | A | -0.5410 | |
| 96 | V | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | W | A | 0.0000 | |
| 99 | Y | A | 0.0000 | |
| 100 | R | A | -0.3272 | |
| 101 | I | A | -0.4227 | |
| 102 | A | A | -0.9860 | |
| 103 | D | A | -2.1384 | |
| 104 | G | A | -1.2620 | |
| 105 | C | A | -0.8815 | |
| 106 | A | A | 0.0000 | |
| 107 | H | A | 0.0014 | |
| 108 | L | A | 0.0000 | |
| 109 | L | A | 0.0000 | |
| 110 | Y | A | 0.0000 | |
| 111 | F | A | 0.0000 | |
| 112 | I | A | 0.0000 | |
| 113 | E | A | 0.0000 | |
| 114 | Y | A | 0.0000 | |
| 115 | A | A | -1.5506 | |
| 116 | D | A | -1.7513 | |
| 117 | C | A | 0.0000 | |
| 118 | D | A | 0.0000 | |
| 119 | P | A | 0.0000 | |
| 120 | R | A | -2.0660 | |
| 121 | Q | A | -0.7224 | |
| 122 | I | A | 0.7254 | |
| 123 | F | A | 0.0000 | |
| 124 | G | A | 0.0000 | |
| 125 | R | A | -1.0888 | |
| 126 | C | A | 0.0000 | |
| 127 | R | A | -2.7298 | |
| 128 | R | A | -2.5231 | |
| 129 | R | A | 0.0000 | |
| 130 | T | A | 0.0000 | |
| 131 | T | A | 0.0000 | |
| 132 | P | A | 0.0000 | |
| 133 | M | A | 0.0000 | |
| 134 | W | A | 0.0000 | |
| 135 | W | A | 0.0000 | |
| 136 | T | A | 0.0000 | |
| 137 | P | A | 0.0000 | |
| 138 | S | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | D | A | -0.2814 | |
| 141 | Y | A | 0.0000 | |
| 142 | M | A | 0.0000 | |
| 143 | F | A | 0.0000 | |
| 144 | P | A | 0.0000 | |
| 145 | T | A | 0.0000 | |
| 146 | E | A | -2.6389 | |
| 147 | D | A | -2.0068 | |
| 148 | E | A | -1.4569 | |
| 149 | L | A | 0.0000 | |
| 150 | G | A | 0.0000 | |
| 151 | L | A | 0.0000 | |
| 152 | L | A | 0.0000 | |
| 153 | M | A | 0.0000 | |
| 154 | V | A | 0.0000 | |
| 155 | A | A | 0.0000 | |
| 156 | P | A | 0.0000 | |
| 157 | G | A | 0.0000 | |
| 158 | R | A | -2.6096 | |
| 159 | F | A | -1.2729 | |
| 160 | N | A | 0.0000 | |
| 161 | E | A | -1.5458 | |
| 162 | G | A | -0.7924 | |
| 163 | Q | A | -0.3925 | |
| 164 | Y | A | 0.0000 | |
| 165 | R | A | -0.2921 | |
| 166 | R | A | 0.0000 | |
| 167 | L | A | 0.0000 | |
| 168 | V | A | 0.0000 | |
| 169 | S | A | 0.0000 | |
| 170 | V | A | 0.0000 | |
| 171 | D | A | -0.7047 | |
| 172 | G | A | -0.3945 | |
| 173 | V | A | 0.6973 | |
| 174 | N | A | -0.0310 | |
| 175 | I | A | -0.0106 | |
| 176 | L | A | 0.0000 | |
| 177 | T | A | 0.0000 | |
| 178 | D | A | 0.0000 | |
| 179 | F | A | 0.0000 | |
| 180 | M | A | -0.0664 | |
| 181 | V | A | 0.0000 | |
| 182 | A | A | -1.0665 | |
| 183 | L | A | -1.4981 | |
| 184 | P | A | -2.1152 | |
| 185 | E | A | -2.9150 | |
| 186 | G | A | -2.2077 | |
| 187 | Q | A | -2.4087 | |
| 188 | E | A | -1.8437 | |
| 189 | C | A | 0.0000 | |
| 190 | P | A | -0.3792 | |
| 191 | F | A | -0.0173 | |
| 192 | A | A | -0.5400 | |
| 193 | R | A | -0.8734 | |
| 194 | V | A | -1.5284 | |
| 195 | D | A | -2.5123 | |
| 196 | Q | A | -1.8905 | |
| 197 | H | A | -2.1819 | |
| 198 | R | A | -2.8738 | |
| 199 | T | A | -1.7311 | |
| 200 | Y | A | -1.4400 | |
| 201 | K | A | -2.2640 | |
| 202 | F | A | -0.8574 | |
| 203 | G | A | -0.6431 | |
| 204 | A | A | -0.4813 | |
| 205 | C | A | -0.0445 | |
| 206 | W | A | 0.0000 | |
| 207 | S | A | -1.5259 | |
| 208 | D | A | -1.8971 | |
| 209 | D | A | -3.1778 | |
| 210 | S | A | -2.3869 | |
| 211 | F | A | 0.0000 | |
| 212 | K | A | -3.4825 | |
| 213 | R | A | -3.4341 | |
| 214 | G | A | -2.2268 | |
| 215 | V | A | 0.0000 | |
| 216 | D | A | -1.0864 | |
| 217 | V | A | 0.0000 | |
| 218 | M | A | -0.5440 | |
| 219 | R | A | -2.0632 | |
| 220 | F | A | -1.0838 | |
| 221 | L | A | 0.0000 | |
| 222 | T | A | 0.0000 | |
| 223 | P | A | 0.0000 | |
| 224 | F | A | 0.0000 | |
| 225 | Y | A | 0.0000 | |
| 226 | Q | A | 0.0000 | |
| 227 | Q | A | 0.0000 | |
| 228 | P | A | -0.7959 | |
| 229 | P | A | 0.0000 | |
| 230 | H | A | 0.0000 | |
| 231 | R | A | -1.1955 | |
| 232 | E | A | -0.6373 | |
| 233 | V | A | 0.0000 | |
| 234 | V | A | 0.0000 | |
| 235 | N | A | 0.0000 | |
| 236 | Y | A | -0.6570 | |
| 237 | W | A | 0.0000 | |
| 238 | Y | A | 0.0000 | |
| 239 | R | A | -1.8121 | |
| 240 | K | A | -1.8747 | |
| 241 | N | A | -1.5476 | |
| 242 | G | A | -1.3232 | |
| 243 | R | A | -1.5391 | |
| 244 | T | A | -1.1227 | |
| 245 | L | A | -0.7308 | |
| 246 | P | A | -0.9552 | |
| 247 | R | A | -1.8054 | |
| 248 | A | A | -0.7348 | |
| 249 | Y | A | -0.1390 | |
| 250 | A | A | 0.0446 | |
| 251 | A | A | -0.2382 | |
| 252 | A | A | 0.0000 | |
| 253 | T | A | 0.4090 | |
| 254 | P | A | 0.4994 | |
| 255 | Y | A | 1.1031 | |
| 256 | A | A | 0.1026 | |
| 257 | I | A | -0.6578 | |
| 258 | D | A | -2.0206 | |
| 259 | P | A | -1.3669 | |
| 260 | A | A | -1.7678 | |
| 261 | R | A | -2.2636 | |
| 262 | P | A | -1.7136 | |
| 263 | S | A | -1.4704 | |
| 264 | A | A | -0.9006 | |
| 265 | G | A | -0.9545 | |
| 266 | S | A | -1.2896 | |
| 267 | P | A | -2.1370 | |
| 268 | R | A | -2.8060 | |
| 269 | P | A | -2.3655 | |
| 270 | R | A | -3.3194 | |
| 271 | P | A | -2.6740 | |
| 272 | R | A | -3.2962 | |
| 273 | P | A | -2.8704 | |
| 274 | R | A | -3.2382 | |
| 275 | P | A | -2.8069 | |
| 276 | R | A | -3.2165 | |
| 277 | P | A | -2.7756 | |
| 278 | R | A | -3.1142 | |
| 279 | P | A | -2.7142 | |
| 280 | K | A | -3.0256 | |
| 281 | P | A | -2.3867 | |
| 282 | E | A | -2.6134 | |
| 283 | P | A | -1.5294 | |
| 284 | A | A | -0.7002 | |
| 285 | P | A | -0.6300 | |
| 286 | A | A | -0.1846 | |
| 287 | T | A | -0.2414 | |
| 288 | P | A | -0.3948 | |
| 289 | A | A | -0.3454 | |
| 290 | P | A | -0.7708 | |
| 291 | P | A | -0.8077 | |
| 292 | G | A | -1.1781 | |
| 293 | R | A | -1.7234 | |
| 294 | L | A | -0.1578 | |
| 295 | P | A | -1.0150 | |
| 296 | E | A | -1.9028 | |
| 297 | P | A | -1.2532 | |
| 298 | A | A | -1.4437 | |
| 299 | T | A | -1.9167 | |
| 300 | R | A | -3.0709 | |
| 301 | D | A | -3.1590 | |
| 302 | H | A | -2.4682 | |
| 303 | A | A | -1.4687 | |
| 304 | A | A | -1.1268 | |
| 305 | G | A | -1.3630 | |
| 306 | G | A | -1.6527 | |
| 307 | R | A | -2.3796 | |
| 308 | P | A | -1.7610 | |
| 309 | T | A | -1.4532 | |
| 310 | P | A | -1.6507 | |
| 311 | R | A | -2.5211 | |
| 312 | P | A | -1.8885 | |
| 313 | P | A | -2.2149 | |
| 314 | R | A | -2.9862 | |
| 315 | P | A | -2.2110 | |
| 316 | E | A | -2.7720 | |
| 317 | T | A | -1.8158 | |
| 318 | P | A | -1.7719 | |
| 319 | H | A | -1.5633 | |
| 320 | R | A | -0.8059 | |
| 321 | P | A | 0.0000 | |
| 322 | F | A | 1.0428 | |
| 323 | A | A | 0.5856 | |
| 324 | P | A | -0.0093 | |
| 325 | P | A | 0.2538 | |
| 326 | A | A | 0.3584 | |
| 327 | V | A | 0.9401 | |
| 328 | V | A | 0.5874 | |
| 329 | P | A | 0.0000 | |
| 330 | S | A | -0.1650 | |
| 331 | G | A | -0.5672 | |
| 332 | W | A | 0.0000 | |
| 333 | P | A | -0.7433 | |
| 334 | Q | A | -1.5392 | |
| 335 | P | A | -1.0025 | |
| 336 | A | A | -0.6045 | |
| 337 | E | A | -0.9769 | |
| 338 | P | A | 0.0912 | |
| 339 | F | A | 0.9327 | |
| 340 | P | A | -0.2486 | |
| 341 | P | A | -1.0083 | |
| 342 | R | A | -1.7464 | |
| 343 | T | A | -1.1132 | |
| 344 | T | A | -0.6908 | |
| 345 | A | A | -0.4233 | |
| 346 | A | A | 0.0752 | |
| 347 | P | A | 0.0124 | |
| 348 | G | A | -0.0293 | |
| 349 | V | A | 0.7095 | |
| 350 | S | A | -0.9766 | |
| 351 | R | A | -2.5257 | |
| 352 | H | A | -2.6006 | |
| 353 | R | A | -2.8812 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine