| Chain sequence(s) |
A: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
C: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY B: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY E: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY D: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY G: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY F: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY I: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY H: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY K: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY J: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY L: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:38)
[INFO] Main: Simulation completed successfully. (00:04:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.4363 | |
| 2 | C | A | -1.3497 | |
| 3 | N | A | -1.8932 | |
| 4 | T | A | -0.8351 | |
| 5 | A | A | -0.1332 | |
| 6 | T | A | 0.3671 | |
| 7 | C | A | 0.8012 | |
| 8 | A | A | 0.1090 | |
| 9 | T | A | -0.8278 | |
| 10 | Q | A | -1.8960 | |
| 11 | R | A | -2.6020 | |
| 12 | L | A | -1.4522 | |
| 13 | A | A | -1.1717 | |
| 14 | N | A | -0.9764 | |
| 15 | F | A | 0.3295 | |
| 16 | L | A | 0.5505 | |
| 17 | V | A | -0.3544 | |
| 18 | R | A | -2.3451 | |
| 19 | S | A | -1.8953 | |
| 20 | S | A | -1.8077 | |
| 21 | N | A | -1.6701 | |
| 22 | N | A | -0.6831 | |
| 23 | L | A | 1.5255 | |
| 24 | G | A | 0.0000 | |
| 25 | P | A | 1.3694 | |
| 26 | V | A | 2.0613 | |
| 27 | L | A | 0.0000 | |
| 28 | P | A | -0.1267 | |
| 29 | P | A | -0.7323 | |
| 30 | T | A | -1.2348 | |
| 31 | N | A | -1.9496 | |
| 32 | V | A | 0.0000 | |
| 33 | G | A | -1.2482 | |
| 34 | S | A | -0.9707 | |
| 35 | N | A | -1.0216 | |
| 36 | T | A | 0.0000 | |
| 37 | Y | A | 1.4134 | |
| 1 | K | B | -3.0526 | |
| 2 | C | B | -1.8638 | |
| 3 | N | B | -1.9795 | |
| 4 | T | B | 0.0000 | |
| 5 | A | B | -0.1194 | |
| 6 | T | B | 0.0000 | |
| 7 | C | B | 0.6736 | |
| 8 | A | B | 0.0000 | |
| 9 | T | B | -0.7645 | |
| 10 | Q | B | 0.0000 | |
| 11 | R | B | -2.8193 | |
| 12 | L | B | 0.0000 | |
| 13 | A | B | -1.6803 | |
| 14 | N | B | -1.3581 | |
| 15 | F | B | 0.0000 | |
| 16 | L | B | -0.5151 | |
| 17 | V | B | 0.0000 | |
| 18 | R | B | -2.8607 | |
| 19 | S | B | -2.5858 | |
| 20 | S | B | -2.0288 | |
| 21 | N | B | -1.6372 | |
| 22 | N | B | 0.0000 | |
| 23 | L | B | 0.6490 | |
| 24 | G | B | 0.0000 | |
| 25 | P | B | 0.0000 | |
| 26 | V | B | 1.4230 | |
| 27 | L | B | 0.0000 | |
| 28 | P | B | 0.0000 | |
| 29 | P | B | -0.9027 | |
| 30 | T | B | 0.0000 | |
| 31 | N | B | -2.1956 | |
| 32 | V | B | 0.0000 | |
| 33 | G | B | -1.1999 | |
| 34 | S | B | 0.0000 | |
| 35 | N | B | -0.2924 | |
| 36 | T | B | 0.0000 | |
| 37 | Y | B | 1.7177 | |
| 1 | K | C | -2.9429 | |
| 2 | C | C | -1.6305 | |
| 3 | N | C | -1.4830 | |
| 4 | T | C | 0.0000 | |
| 5 | A | C | -0.0174 | |
| 6 | T | C | 0.0000 | |
| 7 | C | C | 0.6114 | |
| 8 | A | C | 0.0000 | |
| 9 | T | C | -0.3945 | |
| 10 | Q | C | 0.0000 | |
| 11 | R | C | -1.6935 | |
| 12 | L | C | 0.0000 | |
| 13 | A | C | -1.3532 | |
| 14 | N | C | -1.2081 | |
| 15 | F | C | 0.0000 | |
| 16 | L | C | -0.7041 | |
| 17 | V | C | 0.0000 | |
| 18 | R | C | -2.7397 | |
| 19 | S | C | -2.3733 | |
| 20 | S | C | -1.9023 | |
| 21 | N | C | -1.6673 | |
| 22 | N | C | 0.0000 | |
| 23 | L | C | 0.4174 | |
| 24 | G | C | 0.0000 | |
| 25 | P | C | 0.0000 | |
| 26 | V | C | 0.8942 | |
| 27 | L | C | 0.0000 | |
| 28 | P | C | 0.0000 | |
| 29 | P | C | -0.7478 | |
| 30 | T | C | 0.0000 | |
| 31 | N | C | -1.7592 | |
| 32 | V | C | 0.0000 | |
| 33 | G | C | -0.8817 | |
| 34 | S | C | 0.0000 | |
| 35 | N | C | 0.1447 | |
| 36 | T | C | 0.0000 | |
| 37 | Y | C | 2.0173 | |
| 1 | K | D | -3.0190 | |
| 2 | C | D | -1.7421 | |
| 3 | N | D | -1.7709 | |
| 4 | T | D | 0.0000 | |
| 5 | A | D | -0.0893 | |
| 6 | T | D | 0.0000 | |
| 7 | C | D | 0.6276 | |
| 8 | A | D | 0.0000 | |
| 9 | T | D | -0.2614 | |
| 10 | Q | D | 0.0000 | |
| 11 | R | D | -1.2507 | |
| 12 | L | D | 0.0000 | |
| 13 | A | D | -1.1538 | |
| 14 | N | D | -1.1583 | |
| 15 | F | D | 0.0000 | |
| 16 | L | D | -0.4551 | |
| 17 | V | D | 0.0000 | |
| 18 | R | D | -2.9039 | |
| 19 | S | D | -2.4501 | |
| 20 | S | D | -2.0114 | |
| 21 | N | D | -1.8746 | |
| 22 | N | D | 0.0000 | |
| 23 | L | D | 0.4431 | |
| 24 | G | D | 0.0000 | |
| 25 | P | D | 0.0000 | |
| 26 | V | D | 0.9434 | |
| 27 | L | D | 0.0000 | |
| 28 | P | D | 0.0000 | |
| 29 | P | D | -0.7895 | |
| 30 | T | D | -1.1451 | |
| 31 | N | D | -1.8529 | |
| 32 | V | D | 0.0000 | |
| 33 | G | D | -0.8298 | |
| 34 | S | D | 0.0000 | |
| 35 | N | D | 0.1909 | |
| 36 | T | D | 0.0000 | |
| 37 | Y | D | 2.0879 | |
| 1 | K | E | -3.1056 | |
| 2 | C | E | -1.9882 | |
| 3 | N | E | -2.3207 | |
| 4 | T | E | 0.0000 | |
| 5 | A | E | -0.1642 | |
| 6 | T | E | 0.0000 | |
| 7 | C | E | 0.5974 | |
| 8 | A | E | 0.0000 | |
| 9 | T | E | -0.3458 | |
| 10 | Q | E | 0.0000 | |
| 11 | R | E | -1.6042 | |
| 12 | L | E | 0.0000 | |
| 13 | A | E | -1.1805 | |
| 14 | N | E | -0.9758 | |
| 15 | F | E | 0.0000 | |
| 16 | L | E | -0.4659 | |
| 17 | V | E | 0.0000 | |
| 18 | R | E | -2.8389 | |
| 19 | S | E | -2.4883 | |
| 20 | S | E | -1.9839 | |
| 21 | N | E | -1.8062 | |
| 22 | N | E | 0.0000 | |
| 23 | L | E | 0.4749 | |
| 24 | G | E | 0.0000 | |
| 25 | P | E | 0.0000 | |
| 26 | V | E | 0.9554 | |
| 27 | L | E | 0.0000 | |
| 28 | P | E | 0.0000 | |
| 29 | P | E | -0.7873 | |
| 30 | T | E | -1.1612 | |
| 31 | N | E | -1.7852 | |
| 32 | V | E | 0.0000 | |
| 33 | G | E | -0.8654 | |
| 34 | S | E | 0.0000 | |
| 35 | N | E | 0.1924 | |
| 36 | T | E | 0.0000 | |
| 37 | Y | E | 2.0853 | |
| 1 | K | F | -3.0539 | |
| 2 | C | F | -1.8339 | |
| 3 | N | F | -1.8318 | |
| 4 | T | F | 0.0000 | |
| 5 | A | F | -0.1036 | |
| 6 | T | F | 0.0000 | |
| 7 | C | F | 0.5983 | |
| 8 | A | F | 0.0000 | |
| 9 | T | F | -0.4349 | |
| 10 | Q | F | 0.0000 | |
| 11 | R | F | -1.7714 | |
| 12 | L | F | 0.0000 | |
| 13 | A | F | -1.2143 | |
| 14 | N | F | -0.9487 | |
| 15 | F | F | 0.0000 | |
| 16 | L | F | -0.2514 | |
| 17 | V | F | 0.0000 | |
| 18 | R | F | -2.5638 | |
| 19 | S | F | -2.2922 | |
| 20 | S | F | -1.9169 | |
| 21 | N | F | -1.7436 | |
| 22 | N | F | 0.0000 | |
| 23 | L | F | 0.5235 | |
| 24 | G | F | 0.0000 | |
| 25 | P | F | 0.0000 | |
| 26 | V | F | 1.1107 | |
| 27 | L | F | 0.0000 | |
| 28 | P | F | 0.0000 | |
| 29 | P | F | -0.7612 | |
| 30 | T | F | -1.1655 | |
| 31 | N | F | -1.8701 | |
| 32 | V | F | 0.0000 | |
| 33 | G | F | -0.8370 | |
| 34 | S | F | 0.0000 | |
| 35 | N | F | 0.1825 | |
| 36 | T | F | 0.0000 | |
| 37 | Y | F | 2.0845 | |
| 1 | K | G | -2.9933 | |
| 2 | C | G | -1.7151 | |
| 3 | N | G | -1.7309 | |
| 4 | T | G | 0.0000 | |
| 5 | A | G | -0.0509 | |
| 6 | T | G | 0.0000 | |
| 7 | C | G | 0.6286 | |
| 8 | A | G | 0.0000 | |
| 9 | T | G | -0.5745 | |
| 10 | Q | G | -1.3742 | |
| 11 | R | G | -2.1352 | |
| 12 | L | G | 0.0000 | |
| 13 | A | G | -1.4876 | |
| 14 | N | G | -1.1936 | |
| 15 | F | G | 0.0000 | |
| 16 | L | G | -0.3294 | |
| 17 | V | G | 0.0000 | |
| 18 | R | G | -2.3879 | |
| 19 | S | G | -2.1821 | |
| 20 | S | G | -1.8321 | |
| 21 | N | G | -1.7733 | |
| 22 | N | G | 0.0000 | |
| 23 | L | G | 0.5116 | |
| 24 | G | G | 0.0000 | |
| 25 | P | G | 0.0000 | |
| 26 | V | G | 1.1044 | |
| 27 | L | G | 0.0000 | |
| 28 | P | G | 0.0000 | |
| 29 | P | G | -0.7302 | |
| 30 | T | G | 0.0000 | |
| 31 | N | G | -1.7524 | |
| 32 | V | G | 0.0000 | |
| 33 | G | G | -0.8566 | |
| 34 | S | G | 0.0000 | |
| 35 | N | G | 0.1851 | |
| 36 | T | G | 0.0000 | |
| 37 | Y | G | 2.0813 | |
| 1 | K | H | -3.0204 | |
| 2 | C | H | -1.7786 | |
| 3 | N | H | -1.8727 | |
| 4 | T | H | 0.0000 | |
| 5 | A | H | -0.0922 | |
| 6 | T | H | 0.0000 | |
| 7 | C | H | 0.5841 | |
| 8 | A | H | 0.0000 | |
| 9 | T | H | -0.5398 | |
| 10 | Q | H | 0.0000 | |
| 11 | R | H | -2.4231 | |
| 12 | L | H | 0.0000 | |
| 13 | A | H | -1.4825 | |
| 14 | N | H | -1.2458 | |
| 15 | F | H | 0.0000 | |
| 16 | L | H | -0.3564 | |
| 17 | V | H | 0.0000 | |
| 18 | R | H | -2.1239 | |
| 19 | S | H | -2.0698 | |
| 20 | S | H | -1.8411 | |
| 21 | N | H | -1.7094 | |
| 22 | N | H | 0.0000 | |
| 23 | L | H | 0.5148 | |
| 24 | G | H | 0.0000 | |
| 25 | P | H | 0.0000 | |
| 26 | V | H | 1.0873 | |
| 27 | L | H | 0.0000 | |
| 28 | P | H | 0.0000 | |
| 29 | P | H | -0.6714 | |
| 30 | T | H | 0.0000 | |
| 31 | N | H | -1.7634 | |
| 32 | V | H | 0.0000 | |
| 33 | G | H | -0.8193 | |
| 34 | S | H | 0.0000 | |
| 35 | N | H | 0.1715 | |
| 36 | T | H | 0.0000 | |
| 37 | Y | H | 2.0808 | |
| 1 | K | I | -2.9711 | |
| 2 | C | I | -1.6766 | |
| 3 | N | I | -1.6483 | |
| 4 | T | I | 0.0000 | |
| 5 | A | I | -0.0319 | |
| 6 | T | I | 0.0000 | |
| 7 | C | I | 0.5821 | |
| 8 | A | I | 0.0000 | |
| 9 | T | I | -0.4095 | |
| 10 | Q | I | 0.0000 | |
| 11 | R | I | -1.5471 | |
| 12 | L | I | 0.0000 | |
| 13 | A | I | -1.4172 | |
| 14 | N | I | -1.3456 | |
| 15 | F | I | 0.0000 | |
| 16 | L | I | -0.7277 | |
| 17 | V | I | 0.0000 | |
| 18 | R | I | -2.7809 | |
| 19 | S | I | -2.3186 | |
| 20 | S | I | -1.9200 | |
| 21 | N | I | -1.7857 | |
| 22 | N | I | 0.0000 | |
| 23 | L | I | 0.5128 | |
| 24 | G | I | 0.0000 | |
| 25 | P | I | 0.0000 | |
| 26 | V | I | 1.0813 | |
| 27 | L | I | 0.0000 | |
| 28 | P | I | 0.0000 | |
| 29 | P | I | -0.6375 | |
| 30 | T | I | 0.0000 | |
| 31 | N | I | -1.5985 | |
| 32 | V | I | 0.0000 | |
| 33 | G | I | -0.8407 | |
| 34 | S | I | 0.0000 | |
| 35 | N | I | 0.1159 | |
| 36 | T | I | 0.0000 | |
| 37 | Y | I | 2.0659 | |
| 1 | K | J | -2.9141 | |
| 2 | C | J | -1.5324 | |
| 3 | N | J | -1.3130 | |
| 4 | T | J | 0.0000 | |
| 5 | A | J | 0.0454 | |
| 6 | T | J | 0.0000 | |
| 7 | C | J | 0.5769 | |
| 8 | A | J | 0.0000 | |
| 9 | T | J | -0.3098 | |
| 10 | Q | J | 0.0000 | |
| 11 | R | J | -1.6486 | |
| 12 | L | J | 0.0000 | |
| 13 | A | J | -1.2875 | |
| 14 | N | J | -1.3430 | |
| 15 | F | J | 0.0000 | |
| 16 | L | J | -0.9727 | |
| 17 | V | J | 0.0000 | |
| 18 | R | J | -3.1045 | |
| 19 | S | J | -2.5475 | |
| 20 | S | J | -1.9687 | |
| 21 | N | J | -1.7221 | |
| 22 | N | J | 0.0000 | |
| 23 | L | J | 0.5000 | |
| 24 | G | J | 0.0000 | |
| 25 | P | J | 0.0000 | |
| 26 | V | J | 1.0380 | |
| 27 | L | J | 0.0000 | |
| 28 | P | J | 0.0000 | |
| 29 | P | J | -0.6583 | |
| 30 | T | J | -1.0284 | |
| 31 | N | J | -1.7224 | |
| 32 | V | J | 0.0000 | |
| 33 | G | J | -0.8298 | |
| 34 | S | J | 0.0000 | |
| 35 | N | J | 0.0844 | |
| 36 | T | J | 0.0000 | |
| 37 | Y | J | 2.0524 | |
| 1 | K | K | -2.8300 | |
| 2 | C | K | -1.4423 | |
| 3 | N | K | -1.3651 | |
| 4 | T | K | 0.0000 | |
| 5 | A | K | 0.0319 | |
| 6 | T | K | 0.0000 | |
| 7 | C | K | 0.6496 | |
| 8 | A | K | 0.0000 | |
| 9 | T | K | -0.5484 | |
| 10 | Q | K | 0.0000 | |
| 11 | R | K | -1.7401 | |
| 12 | L | K | 0.0000 | |
| 13 | A | K | -1.2501 | |
| 14 | N | K | -0.9640 | |
| 15 | F | K | 0.0000 | |
| 16 | L | K | -0.3669 | |
| 17 | V | K | 0.0000 | |
| 18 | R | K | -2.8244 | |
| 19 | S | K | -2.6027 | |
| 20 | S | K | -2.1673 | |
| 21 | N | K | -1.8090 | |
| 22 | N | K | 0.0000 | |
| 23 | L | K | 0.5720 | |
| 24 | G | K | 0.0000 | |
| 25 | P | K | 0.0000 | |
| 26 | V | K | 1.3709 | |
| 27 | L | K | 0.0000 | |
| 28 | P | K | 0.0000 | |
| 29 | P | K | -0.5815 | |
| 30 | T | K | 0.0000 | |
| 31 | N | K | -1.4018 | |
| 32 | V | K | 0.0000 | |
| 33 | G | K | -0.8305 | |
| 34 | S | K | 0.0000 | |
| 35 | N | K | -0.3569 | |
| 36 | T | K | 0.0000 | |
| 37 | Y | K | 1.9781 | |
| 1 | K | L | -2.1739 | |
| 2 | C | L | -0.8125 | |
| 3 | N | L | -1.1776 | |
| 4 | T | L | -0.5436 | |
| 5 | A | L | -0.0290 | |
| 6 | T | L | 0.5008 | |
| 7 | C | L | 0.8743 | |
| 8 | A | L | 0.2520 | |
| 9 | T | L | -0.5909 | |
| 10 | Q | L | -1.2490 | |
| 11 | R | L | -2.0081 | |
| 12 | L | L | -0.7109 | |
| 13 | A | L | -0.7191 | |
| 14 | N | L | -0.7935 | |
| 15 | F | L | 0.5967 | |
| 16 | L | L | 0.9153 | |
| 17 | V | L | 0.1344 | |
| 18 | R | L | -2.1417 | |
| 19 | S | L | -2.0658 | |
| 20 | S | L | -1.7965 | |
| 21 | N | L | -1.9001 | |
| 22 | N | L | -0.9827 | |
| 23 | L | L | 1.0732 | |
| 24 | G | L | 1.0255 | |
| 25 | P | L | 1.2808 | |
| 26 | V | L | 1.9662 | |
| 27 | L | L | 1.6495 | |
| 28 | P | L | 0.4888 | |
| 29 | P | L | -0.2173 | |
| 30 | T | L | -0.6178 | |
| 31 | N | L | -1.0496 | |
| 32 | V | L | 0.3871 | |
| 33 | G | L | -0.4762 | |
| 34 | S | L | -0.8288 | |
| 35 | N | L | -1.0936 | |
| 36 | T | L | 0.1316 | |
| 37 | Y | L | 1.4473 |