Project name: 94b410cf9317577

Status: done

Started: 2026-06-27 15:53:22
Settings
Chain sequence(s) A: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
C: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
B: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
E: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
D: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
G: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
F: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
I: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
H: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
K: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
J: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
L: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:42)
Show buried residues

Minimal score value
-3.1056
Maximal score value
2.0879
Average score
-0.5352
Total score value
-237.6112

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.4363
2 C A -1.3497
3 N A -1.8932
4 T A -0.8351
5 A A -0.1332
6 T A 0.3671
7 C A 0.8012
8 A A 0.1090
9 T A -0.8278
10 Q A -1.8960
11 R A -2.6020
12 L A -1.4522
13 A A -1.1717
14 N A -0.9764
15 F A 0.3295
16 L A 0.5505
17 V A -0.3544
18 R A -2.3451
19 S A -1.8953
20 S A -1.8077
21 N A -1.6701
22 N A -0.6831
23 L A 1.5255
24 G A 0.0000
25 P A 1.3694
26 V A 2.0613
27 L A 0.0000
28 P A -0.1267
29 P A -0.7323
30 T A -1.2348
31 N A -1.9496
32 V A 0.0000
33 G A -1.2482
34 S A -0.9707
35 N A -1.0216
36 T A 0.0000
37 Y A 1.4134
1 K B -3.0526
2 C B -1.8638
3 N B -1.9795
4 T B 0.0000
5 A B -0.1194
6 T B 0.0000
7 C B 0.6736
8 A B 0.0000
9 T B -0.7645
10 Q B 0.0000
11 R B -2.8193
12 L B 0.0000
13 A B -1.6803
14 N B -1.3581
15 F B 0.0000
16 L B -0.5151
17 V B 0.0000
18 R B -2.8607
19 S B -2.5858
20 S B -2.0288
21 N B -1.6372
22 N B 0.0000
23 L B 0.6490
24 G B 0.0000
25 P B 0.0000
26 V B 1.4230
27 L B 0.0000
28 P B 0.0000
29 P B -0.9027
30 T B 0.0000
31 N B -2.1956
32 V B 0.0000
33 G B -1.1999
34 S B 0.0000
35 N B -0.2924
36 T B 0.0000
37 Y B 1.7177
1 K C -2.9429
2 C C -1.6305
3 N C -1.4830
4 T C 0.0000
5 A C -0.0174
6 T C 0.0000
7 C C 0.6114
8 A C 0.0000
9 T C -0.3945
10 Q C 0.0000
11 R C -1.6935
12 L C 0.0000
13 A C -1.3532
14 N C -1.2081
15 F C 0.0000
16 L C -0.7041
17 V C 0.0000
18 R C -2.7397
19 S C -2.3733
20 S C -1.9023
21 N C -1.6673
22 N C 0.0000
23 L C 0.4174
24 G C 0.0000
25 P C 0.0000
26 V C 0.8942
27 L C 0.0000
28 P C 0.0000
29 P C -0.7478
30 T C 0.0000
31 N C -1.7592
32 V C 0.0000
33 G C -0.8817
34 S C 0.0000
35 N C 0.1447
36 T C 0.0000
37 Y C 2.0173
1 K D -3.0190
2 C D -1.7421
3 N D -1.7709
4 T D 0.0000
5 A D -0.0893
6 T D 0.0000
7 C D 0.6276
8 A D 0.0000
9 T D -0.2614
10 Q D 0.0000
11 R D -1.2507
12 L D 0.0000
13 A D -1.1538
14 N D -1.1583
15 F D 0.0000
16 L D -0.4551
17 V D 0.0000
18 R D -2.9039
19 S D -2.4501
20 S D -2.0114
21 N D -1.8746
22 N D 0.0000
23 L D 0.4431
24 G D 0.0000
25 P D 0.0000
26 V D 0.9434
27 L D 0.0000
28 P D 0.0000
29 P D -0.7895
30 T D -1.1451
31 N D -1.8529
32 V D 0.0000
33 G D -0.8298
34 S D 0.0000
35 N D 0.1909
36 T D 0.0000
37 Y D 2.0879
1 K E -3.1056
2 C E -1.9882
3 N E -2.3207
4 T E 0.0000
5 A E -0.1642
6 T E 0.0000
7 C E 0.5974
8 A E 0.0000
9 T E -0.3458
10 Q E 0.0000
11 R E -1.6042
12 L E 0.0000
13 A E -1.1805
14 N E -0.9758
15 F E 0.0000
16 L E -0.4659
17 V E 0.0000
18 R E -2.8389
19 S E -2.4883
20 S E -1.9839
21 N E -1.8062
22 N E 0.0000
23 L E 0.4749
24 G E 0.0000
25 P E 0.0000
26 V E 0.9554
27 L E 0.0000
28 P E 0.0000
29 P E -0.7873
30 T E -1.1612
31 N E -1.7852
32 V E 0.0000
33 G E -0.8654
34 S E 0.0000
35 N E 0.1924
36 T E 0.0000
37 Y E 2.0853
1 K F -3.0539
2 C F -1.8339
3 N F -1.8318
4 T F 0.0000
5 A F -0.1036
6 T F 0.0000
7 C F 0.5983
8 A F 0.0000
9 T F -0.4349
10 Q F 0.0000
11 R F -1.7714
12 L F 0.0000
13 A F -1.2143
14 N F -0.9487
15 F F 0.0000
16 L F -0.2514
17 V F 0.0000
18 R F -2.5638
19 S F -2.2922
20 S F -1.9169
21 N F -1.7436
22 N F 0.0000
23 L F 0.5235
24 G F 0.0000
25 P F 0.0000
26 V F 1.1107
27 L F 0.0000
28 P F 0.0000
29 P F -0.7612
30 T F -1.1655
31 N F -1.8701
32 V F 0.0000
33 G F -0.8370
34 S F 0.0000
35 N F 0.1825
36 T F 0.0000
37 Y F 2.0845
1 K G -2.9933
2 C G -1.7151
3 N G -1.7309
4 T G 0.0000
5 A G -0.0509
6 T G 0.0000
7 C G 0.6286
8 A G 0.0000
9 T G -0.5745
10 Q G -1.3742
11 R G -2.1352
12 L G 0.0000
13 A G -1.4876
14 N G -1.1936
15 F G 0.0000
16 L G -0.3294
17 V G 0.0000
18 R G -2.3879
19 S G -2.1821
20 S G -1.8321
21 N G -1.7733
22 N G 0.0000
23 L G 0.5116
24 G G 0.0000
25 P G 0.0000
26 V G 1.1044
27 L G 0.0000
28 P G 0.0000
29 P G -0.7302
30 T G 0.0000
31 N G -1.7524
32 V G 0.0000
33 G G -0.8566
34 S G 0.0000
35 N G 0.1851
36 T G 0.0000
37 Y G 2.0813
1 K H -3.0204
2 C H -1.7786
3 N H -1.8727
4 T H 0.0000
5 A H -0.0922
6 T H 0.0000
7 C H 0.5841
8 A H 0.0000
9 T H -0.5398
10 Q H 0.0000
11 R H -2.4231
12 L H 0.0000
13 A H -1.4825
14 N H -1.2458
15 F H 0.0000
16 L H -0.3564
17 V H 0.0000
18 R H -2.1239
19 S H -2.0698
20 S H -1.8411
21 N H -1.7094
22 N H 0.0000
23 L H 0.5148
24 G H 0.0000
25 P H 0.0000
26 V H 1.0873
27 L H 0.0000
28 P H 0.0000
29 P H -0.6714
30 T H 0.0000
31 N H -1.7634
32 V H 0.0000
33 G H -0.8193
34 S H 0.0000
35 N H 0.1715
36 T H 0.0000
37 Y H 2.0808
1 K I -2.9711
2 C I -1.6766
3 N I -1.6483
4 T I 0.0000
5 A I -0.0319
6 T I 0.0000
7 C I 0.5821
8 A I 0.0000
9 T I -0.4095
10 Q I 0.0000
11 R I -1.5471
12 L I 0.0000
13 A I -1.4172
14 N I -1.3456
15 F I 0.0000
16 L I -0.7277
17 V I 0.0000
18 R I -2.7809
19 S I -2.3186
20 S I -1.9200
21 N I -1.7857
22 N I 0.0000
23 L I 0.5128
24 G I 0.0000
25 P I 0.0000
26 V I 1.0813
27 L I 0.0000
28 P I 0.0000
29 P I -0.6375
30 T I 0.0000
31 N I -1.5985
32 V I 0.0000
33 G I -0.8407
34 S I 0.0000
35 N I 0.1159
36 T I 0.0000
37 Y I 2.0659
1 K J -2.9141
2 C J -1.5324
3 N J -1.3130
4 T J 0.0000
5 A J 0.0454
6 T J 0.0000
7 C J 0.5769
8 A J 0.0000
9 T J -0.3098
10 Q J 0.0000
11 R J -1.6486
12 L J 0.0000
13 A J -1.2875
14 N J -1.3430
15 F J 0.0000
16 L J -0.9727
17 V J 0.0000
18 R J -3.1045
19 S J -2.5475
20 S J -1.9687
21 N J -1.7221
22 N J 0.0000
23 L J 0.5000
24 G J 0.0000
25 P J 0.0000
26 V J 1.0380
27 L J 0.0000
28 P J 0.0000
29 P J -0.6583
30 T J -1.0284
31 N J -1.7224
32 V J 0.0000
33 G J -0.8298
34 S J 0.0000
35 N J 0.0844
36 T J 0.0000
37 Y J 2.0524
1 K K -2.8300
2 C K -1.4423
3 N K -1.3651
4 T K 0.0000
5 A K 0.0319
6 T K 0.0000
7 C K 0.6496
8 A K 0.0000
9 T K -0.5484
10 Q K 0.0000
11 R K -1.7401
12 L K 0.0000
13 A K -1.2501
14 N K -0.9640
15 F K 0.0000
16 L K -0.3669
17 V K 0.0000
18 R K -2.8244
19 S K -2.6027
20 S K -2.1673
21 N K -1.8090
22 N K 0.0000
23 L K 0.5720
24 G K 0.0000
25 P K 0.0000
26 V K 1.3709
27 L K 0.0000
28 P K 0.0000
29 P K -0.5815
30 T K 0.0000
31 N K -1.4018
32 V K 0.0000
33 G K -0.8305
34 S K 0.0000
35 N K -0.3569
36 T K 0.0000
37 Y K 1.9781
1 K L -2.1739
2 C L -0.8125
3 N L -1.1776
4 T L -0.5436
5 A L -0.0290
6 T L 0.5008
7 C L 0.8743
8 A L 0.2520
9 T L -0.5909
10 Q L -1.2490
11 R L -2.0081
12 L L -0.7109
13 A L -0.7191
14 N L -0.7935
15 F L 0.5967
16 L L 0.9153
17 V L 0.1344
18 R L -2.1417
19 S L -2.0658
20 S L -1.7965
21 N L -1.9001
22 N L -0.9827
23 L L 1.0732
24 G L 1.0255
25 P L 1.2808
26 V L 1.9662
27 L L 1.6495
28 P L 0.4888
29 P L -0.2173
30 T L -0.6178
31 N L -1.0496
32 V L 0.3871
33 G L -0.4762
34 S L -0.8288
35 N L -1.0936
36 T L 0.1316
37 Y L 1.4473
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018