| Chain sequence(s) |
A: VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:45)
[INFO] Main: Simulation completed successfully. (00:02:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7494 | |
| 2 | L | A | 0.6014 | |
| 3 | S | A | 0.1848 | |
| 4 | P | A | -0.3923 | |
| 5 | A | A | -0.3702 | |
| 6 | D | A | 0.0000 | |
| 7 | K | A | -1.0744 | |
| 8 | T | A | -0.7425 | |
| 9 | N | A | -0.8220 | |
| 10 | V | A | 0.0000 | |
| 11 | K | A | -1.4331 | |
| 12 | A | A | -1.2605 | |
| 13 | A | A | 0.0000 | |
| 14 | W | A | 0.0000 | |
| 15 | G | A | -1.6834 | |
| 16 | K | A | -2.3673 | |
| 17 | V | A | 0.0000 | |
| 18 | G | A | -1.3596 | |
| 19 | A | A | -0.9401 | |
| 20 | H | A | -1.6130 | |
| 21 | A | A | -1.9202 | |
| 22 | G | A | -2.7138 | |
| 23 | E | A | -2.3848 | |
| 24 | Y | A | 0.0000 | |
| 25 | G | A | 0.0000 | |
| 26 | A | A | -2.2687 | |
| 27 | E | A | -1.4051 | |
| 28 | A | A | 0.0000 | |
| 29 | L | A | 0.0000 | |
| 30 | E | A | -0.7096 | |
| 31 | R | A | -0.1933 | |
| 32 | M | A | 0.0000 | |
| 33 | F | A | 0.0000 | |
| 34 | L | A | 1.1750 | |
| 35 | S | A | 0.5760 | |
| 36 | F | A | 0.4925 | |
| 37 | P | A | 0.0541 | |
| 38 | T | A | -0.0996 | |
| 39 | T | A | 0.0000 | |
| 40 | K | A | -0.3683 | |
| 41 | T | A | -0.3020 | |
| 42 | Y | A | -0.0756 | |
| 43 | F | A | -0.2748 | |
| 44 | P | A | -0.7072 | |
| 45 | H | A | -1.1929 | |
| 46 | F | A | -0.9117 | |
| 47 | D | A | -1.7024 | |
| 48 | L | A | -1.1783 | |
| 49 | S | A | -1.1353 | |
| 50 | H | A | -1.8001 | |
| 51 | G | A | -1.6622 | |
| 52 | S | A | 0.0000 | |
| 53 | A | A | -1.2949 | |
| 54 | Q | A | -1.7133 | |
| 55 | V | A | 0.0000 | |
| 56 | K | A | -2.9377 | |
| 57 | G | A | -2.4484 | |
| 58 | H | A | -2.1965 | |
| 59 | G | A | 0.0000 | |
| 60 | K | A | -3.7510 | |
| 61 | K | A | -3.1580 | |
| 62 | V | A | -1.8381 | |
| 63 | A | A | 0.0000 | |
| 64 | D | A | -2.9987 | |
| 65 | A | A | -1.8020 | |
| 66 | L | A | 0.0000 | |
| 67 | T | A | -1.6889 | |
| 68 | N | A | -1.7625 | |
| 69 | A | A | 0.0000 | |
| 70 | V | A | 0.0000 | |
| 71 | A | A | -1.3261 | |
| 72 | H | A | -2.2787 | |
| 73 | V | A | -1.9127 | |
| 74 | D | A | -2.7885 | |
| 75 | D | A | -2.7387 | |
| 76 | M | A | 0.0000 | |
| 77 | P | A | -1.7230 | |
| 78 | N | A | -2.1210 | |
| 79 | A | A | -1.6362 | |
| 80 | L | A | 0.0000 | |
| 81 | S | A | -0.7542 | |
| 82 | A | A | -0.2489 | |
| 83 | L | A | -0.1001 | |
| 84 | S | A | 0.0000 | |
| 85 | D | A | -1.4481 | |
| 86 | L | A | -0.9778 | |
| 87 | H | A | -1.4384 | |
| 88 | A | A | 0.0000 | |
| 89 | H | A | -2.5192 | |
| 90 | K | A | -2.3764 | |
| 91 | L | A | -1.3008 | |
| 92 | R | A | -2.5751 | |
| 93 | V | A | -1.4012 | |
| 94 | D | A | -1.6191 | |
| 95 | P | A | -0.8387 | |
| 96 | V | A | 0.1448 | |
| 97 | N | A | -0.3262 | |
| 98 | F | A | -0.5319 | |
| 99 | K | A | -1.5232 | |
| 100 | L | A | -0.5202 | |
| 101 | L | A | -0.2368 | |
| 102 | S | A | -1.0292 | |
| 103 | H | A | -1.1316 | |
| 104 | C | A | 0.0000 | |
| 105 | L | A | 0.0000 | |
| 106 | L | A | 0.0000 | |
| 107 | V | A | 0.2566 | |
| 108 | T | A | 0.0000 | |
| 109 | L | A | 0.0000 | |
| 110 | A | A | 0.0101 | |
| 111 | A | A | 0.0387 | |
| 112 | H | A | -0.5572 | |
| 113 | L | A | 0.0000 | |
| 114 | P | A | -0.3557 | |
| 115 | A | A | -0.2549 | |
| 116 | E | A | -0.7714 | |
| 117 | F | A | -0.2220 | |
| 118 | T | A | -0.2770 | |
| 119 | P | A | -0.3653 | |
| 120 | A | A | -0.1919 | |
| 121 | V | A | -0.5738 | |
| 122 | H | A | -1.0515 | |
| 123 | A | A | -0.9507 | |
| 124 | S | A | 0.0000 | |
| 125 | L | A | 0.0000 | |
| 126 | D | A | -2.3330 | |
| 127 | K | A | -1.2324 | |
| 128 | F | A | 0.0000 | |
| 129 | L | A | 0.0000 | |
| 130 | A | A | -0.8429 | |
| 131 | S | A | -0.0870 | |
| 132 | V | A | 0.0000 | |
| 133 | S | A | -0.2656 | |
| 134 | T | A | -0.2072 | |
| 135 | V | A | 0.0000 | |
| 136 | L | A | -0.1640 | |
| 137 | T | A | -0.9376 | |
| 138 | S | A | -1.0112 | |
| 139 | K | A | -1.6305 | |
| 140 | Y | A | -1.9038 | |
| 141 | R | A | -2.1255 |