| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLWNKLGDTENPTAYQHEGADVRVNFSFDPKQTQLFIVGCEPPTGEHWDLAAPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFRRAGPDGHPLPDDPPPSPLYEPPPPSSPYAVRPSTNYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEDNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9503 | |
| 2 | L | A | 1.9720 | |
| 3 | P | A | 0.6577 | |
| 4 | P | A | 0.3687 | |
| 5 | T | A | 0.1209 | |
| 6 | T | A | 0.1342 | |
| 7 | P | A | 0.1804 | |
| 8 | V | A | 1.2188 | |
| 9 | A | A | 0.0369 | |
| 10 | K | A | -1.1485 | |
| 11 | V | A | -0.3911 | |
| 12 | Q | A | -1.5169 | |
| 13 | S | A | -1.6025 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4317 | |
| 16 | E | A | -2.4450 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4577 | |
| 20 | P | A | 0.1057 | |
| 21 | T | A | 0.1149 | |
| 22 | S | A | -0.1673 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0899 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1710 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7825 | |
| 31 | R | A | -2.6274 | |
| 32 | L | A | -0.7575 | |
| 33 | L | A | 1.1709 | |
| 34 | T | A | 1.3561 | |
| 35 | V | A | 1.7984 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2447 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6227 | |
| 40 | K | A | -1.6460 | |
| 41 | D | A | -0.9417 | |
| 42 | I | A | 0.8141 | |
| 43 | V | A | 1.0088 | |
| 44 | K | A | -1.1892 | |
| 45 | N | A | -1.9283 | |
| 46 | G | A | -1.2331 | |
| 47 | K | A | -0.9504 | |
| 48 | V | A | 1.4998 | |
| 49 | V | A | 2.0581 | |
| 50 | V | A | 1.2663 | |
| 51 | P | A | 0.4579 | |
| 52 | K | A | -0.6448 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1039 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4819 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2653 | |
| 70 | K | A | -1.8104 | |
| 71 | F | A | -0.6670 | |
| 72 | A | A | -0.5795 | |
| 73 | L | A | -0.8725 | |
| 74 | P | A | -1.2695 | |
| 75 | Q | A | -2.4827 | |
| 76 | K | A | -3.0980 | |
| 77 | D | A | -2.9912 | |
| 78 | F | A | -1.6510 | |
| 79 | Y | A | -1.9145 | |
| 80 | D | A | -2.7523 | |
| 81 | P | A | -2.3501 | |
| 82 | E | A | -3.0734 | |
| 83 | K | A | -3.4437 | |
| 84 | E | A | -2.5065 | |
| 85 | R | A | -1.3169 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6322 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9553 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3234 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6863 | |
| 99 | G | A | -0.5466 | |
| 100 | P | A | -0.4429 | |
| 101 | L | A | -0.0295 | |
| 102 | G | A | -0.3285 | |
| 103 | K | A | -0.8330 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4912 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.0834 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1167 | |
| 110 | L | A | 0.0605 | |
| 111 | W | A | 0.0000 | |
| 112 | N | A | -1.1492 | |
| 113 | K | A | -0.6641 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3782 | |
| 117 | T | A | -1.1642 | |
| 118 | E | A | -2.4608 | |
| 119 | N | A | -2.2855 | |
| 120 | P | A | -1.5171 | |
| 121 | T | A | -0.7769 | |
| 122 | A | A | -0.3970 | |
| 123 | Y | A | -0.0596 | |
| 124 | Q | A | -1.3923 | |
| 125 | H | A | -1.8228 | |
| 126 | E | A | -2.5987 | |
| 127 | G | A | -2.1354 | |
| 128 | A | A | -1.4107 | |
| 129 | D | A | -2.1520 | |
| 130 | V | A | -1.4176 | |
| 131 | R | A | -1.1033 | |
| 132 | V | A | -0.2586 | |
| 133 | N | A | -0.8601 | |
| 134 | F | A | -0.3412 | |
| 135 | S | A | -0.3490 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7214 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5573 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2497 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1268 | |
| 157 | D | A | 0.4920 | |
| 158 | L | A | 1.1945 | |
| 159 | A | A | 1.0682 | |
| 160 | A | A | 0.3955 | |
| 161 | P | A | 0.6173 | |
| 162 | C | A | 0.5849 | |
| 163 | P | A | 0.0503 | |
| 164 | G | A | -0.0882 | |
| 165 | L | A | 0.5649 | |
| 166 | P | A | -0.1171 | |
| 167 | P | A | -0.3424 | |
| 168 | G | A | -0.4185 | |
| 169 | A | A | -0.0185 | |
| 170 | C | A | 0.6749 | |
| 171 | P | A | 0.7949 | |
| 172 | P | A | 1.1883 | |
| 173 | I | A | 2.3295 | |
| 174 | Q | A | 1.1306 | |
| 175 | L | A | 1.4747 | |
| 176 | V | A | 0.8260 | |
| 177 | N | A | -0.3401 | |
| 178 | S | A | 0.0173 | |
| 179 | V | A | 0.4214 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3774 | |
| 182 | D | A | 0.0828 | |
| 183 | G | A | -0.1611 | |
| 184 | D | A | -0.5695 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1597 | |
| 190 | F | A | 0.0679 | |
| 191 | G | A | -0.0997 | |
| 192 | N | A | -0.2811 | |
| 193 | M | A | -0.1589 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4314 | |
| 197 | E | A | -2.6589 | |
| 198 | L | A | -1.2477 | |
| 199 | Q | A | -2.5559 | |
| 200 | Q | A | -3.3454 | |
| 201 | D | A | -3.6034 | |
| 202 | R | A | -3.3244 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2180 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3697 | |
| 211 | S | A | -1.8975 | |
| 212 | T | A | -1.4863 | |
| 213 | R | A | -2.1954 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1812 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3033 | |
| 220 | L | A | 0.5130 | |
| 221 | K | A | -1.2837 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9546 | |
| 224 | N | A | -1.5625 | |
| 225 | E | A | -1.3100 | |
| 226 | A | A | -0.6629 | |
| 227 | Y | A | -0.4468 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7033 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1314 | |
| 234 | F | A | -0.0027 | |
| 235 | G | A | -0.8748 | |
| 236 | R | A | -2.5911 | |
| 237 | R | A | -2.7576 | |
| 238 | E | A | -2.0538 | |
| 239 | Q | A | -0.0367 | |
| 240 | V | A | 1.5665 | |
| 241 | Y | A | 1.2508 | |
| 242 | A | A | 0.1627 | |
| 243 | R | A | -1.3121 | |
| 244 | H | A | -1.1621 | |
| 245 | F | A | -0.1382 | |
| 246 | F | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5099 | |
| 249 | A | A | -1.2556 | |
| 250 | G | A | -1.0742 | |
| 251 | P | A | -1.2108 | |
| 252 | D | A | -1.4078 | |
| 253 | G | A | -1.2448 | |
| 254 | H | A | -1.4164 | |
| 255 | P | A | -1.3226 | |
| 256 | L | A | -0.4976 | |
| 257 | P | A | -1.0273 | |
| 258 | D | A | -2.4463 | |
| 259 | D | A | -1.9686 | |
| 260 | P | A | -1.6075 | |
| 261 | P | A | -1.3192 | |
| 262 | P | A | -0.8994 | |
| 263 | S | A | -0.9332 | |
| 264 | P | A | 0.0112 | |
| 265 | L | A | 1.0518 | |
| 266 | Y | A | -0.3093 | |
| 267 | E | A | -1.9966 | |
| 268 | P | A | -1.4012 | |
| 269 | P | A | -0.3966 | |
| 270 | P | A | -0.5660 | |
| 271 | P | A | -0.1500 | |
| 272 | S | A | -0.1234 | |
| 273 | S | A | 0.2706 | |
| 274 | P | A | 0.3868 | |
| 275 | Y | A | 1.2297 | |
| 276 | A | A | 0.9317 | |
| 277 | V | A | 1.2622 | |
| 278 | R | A | 0.0804 | |
| 279 | P | A | -0.5852 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4242 | |
| 282 | N | A | -0.4826 | |
| 283 | Y | A | 1.1004 | |
| 284 | F | A | 0.8086 | |
| 285 | G | A | 0.1489 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9514 | |
| 291 | L | A | 1.6285 | |
| 292 | V | A | 0.5900 | |
| 293 | S | A | -0.1443 | |
| 294 | S | A | -0.9653 | |
| 295 | D | A | -1.8374 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0884 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6404 | |
| 301 | R | A | -1.8542 | |
| 302 | P | A | -0.9387 | |
| 303 | F | A | -0.1893 | |
| 304 | W | A | -0.4923 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0736 | |
| 307 | R | A | -2.9236 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6537 | |
| 310 | G | A | -1.4179 | |
| 311 | N | A | -1.3894 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9603 | |
| 319 | N | A | -0.8934 | |
| 320 | E | A | -1.0496 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4036 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1687 | |
| 333 | N | A | 0.4958 | |
| 334 | F | A | 1.7142 | |
| 335 | T | A | 0.8705 | |
| 336 | I | A | 0.4616 | |
| 337 | S | A | -0.9515 | |
| 338 | Q | A | -1.7537 | |
| 339 | Q | A | -1.3252 | |
| 340 | L | A | 0.6432 | |
| 341 | C | A | 0.2552 | |
| 342 | T | A | -0.4887 | |
| 343 | P | A | -1.0093 | |
| 344 | E | A | -2.4814 | |
| 345 | D | A | -2.5682 | |
| 346 | N | A | -1.5778 | |
| 347 | V | A | 0.4958 | |
| 348 | Y | A | 0.9386 | |
| 349 | D | A | -0.1593 | |
| 350 | P | A | -0.4131 | |
| 351 | S | A | -0.3382 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8233 | |
| 354 | K | A | -1.8079 | |
| 355 | N | A | -1.7686 | |
| 356 | Y | A | -0.0767 | |
| 357 | L | A | 0.6475 | |
| 358 | R | A | 0.9506 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3361 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0253 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9404 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6835 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2842 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3308 | |
| 376 | L | A | -1.7588 | |
| 377 | D | A | -2.0466 | |
| 378 | P | A | -1.0696 | |
| 379 | G | A | -1.0279 | |
| 380 | V | A | -0.9398 | |
| 381 | L | A | -0.5465 | |
| 382 | A | A | -0.6640 | |
| 383 | H | A | -0.8509 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4084 | |
| 386 | T | A | -0.5756 | |
| 387 | M | A | -0.3291 | |
| 388 | N | A | -0.8680 | |
| 389 | P | A | -1.2943 | |
| 390 | T | A | -1.6389 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.6087 | |
| 393 | E | A | -3.0614 | |
| 394 | N | A | -2.8977 | |
| 395 | W | A | -1.6356 | |
| 396 | N | A | -1.4652 | |
| 397 | L | A | -0.2691 | |
| 398 | G | A | 0.5056 | |
| 399 | F | A | 2.4121 | |
| 400 | V | A | 1.8240 | |
| 401 | P | A | 0.0352 | |
| 402 | P | A | -2.0184 | |
| 403 | K | A | -3.7026 | |
| 404 | E | A | -4.1487 | |
| 405 | R | A | -4.7517 | |
| 406 | E | A | -4.1579 | |
| 407 | D | A | -3.0412 | |
| 408 | P | A | -1.8615 | |
| 409 | Y | A | -0.9828 | |
| 410 | K | A | -2.1039 | |
| 411 | G | A | -0.6346 | |
| 412 | L | A | 0.6662 | |
| 413 | I | A | 1.5854 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3762 | |
| 416 | E | A | -1.6254 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8294 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8837 | |
| 421 | E | A | -2.4951 | |
| 422 | R | A | -2.0638 | |
| 423 | F | A | -1.0159 | |
| 424 | S | A | -1.3187 | |
| 425 | Q | A | -1.8469 | |
| 426 | D | A | -2.8997 | |
| 427 | L | A | -2.0111 | |
| 428 | D | A | -2.8215 | |
| 429 | Q | A | -2.6306 | |
| 430 | F | A | -1.4633 | |
| 431 | A | A | -0.9173 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6105 | |
| 435 | K | A | -0.7437 | |
| 436 | F | A | 0.1437 | |
| 437 | L | A | 1.0221 | |
| 438 | Y | A | 0.8192 | |
| 439 | Q | A | -0.2698 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine