Project name: query_structure

Status: done

Started: 2026-03-16 19:59:06
Settings
Chain sequence(s) D: CLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:30)
Show buried residues

Minimal score value
-2.9983
Maximal score value
2.1238
Average score
-0.2565
Total score value
-13.0819

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
5 C D 1.0016
6 L D 1.7377
7 L D 1.1690
8 P D 0.4232
9 L D 0.6705
10 D D -0.3765
11 Y D 0.6451
12 G D -0.7819
13 P D -0.8726
14 C D -0.6799
15 R D -1.1889
16 A D 0.4445
17 L D 2.1238
18 L D 2.0674
19 L D 1.6848
20 R D 0.9443
21 Y D -0.3179
22 Y D 0.0000
23 Y D -0.4531
24 D D 0.0000
25 R D -0.7670
26 Y D 0.3764
27 T D -0.6914
28 Q D -1.3609
29 S D -1.4525
30 C D 0.0000
31 R D -2.3593
32 Q D -1.3104
33 F D 0.0000
34 L D 1.6983
35 Y D 0.0000
36 G D 0.0000
37 G D -0.0860
38 C D -1.1192
39 E D -1.9481
40 G D -1.2003
41 N D -0.7480
42 A D -0.1185
43 N D 0.0000
44 N D 0.4020
45 F D 0.5234
46 Y D 1.3753
47 T D -0.0265
48 W D -1.0522
49 E D -2.2706
50 A D -1.3532
51 C D 0.0000
52 D D -2.9983
53 D D -2.8611
54 A D -1.2300
55 C D -0.7449
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Laboratory of Theory of Biopolymers 2018