| Chain sequence(s) |
B: PVFRVVAYDEFGNEVASAEGTTREEAIEAARKVGAVAGTSPLPVTIKVYVDGELIAEAEGAGVGAPKAAEEAVEEAFEKL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:31)
[INFO] Main: Simulation completed successfully. (00:01:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | B | -0.5057 | |
| 2 | V | B | -0.8709 | |
| 3 | F | B | 0.0000 | |
| 4 | R | B | -1.7762 | |
| 5 | V | B | 0.0000 | |
| 6 | V | B | 0.0000 | |
| 7 | A | B | 0.0000 | |
| 8 | Y | B | -1.4737 | |
| 9 | D | B | -1.1529 | |
| 10 | E | B | -1.3636 | |
| 11 | F | B | 0.1274 | |
| 12 | G | B | -1.0728 | |
| 13 | N | B | -1.8905 | |
| 14 | E | B | -2.1492 | |
| 15 | V | B | -0.4136 | |
| 16 | A | B | -0.4251 | |
| 17 | S | B | -1.0818 | |
| 18 | A | B | -2.0099 | |
| 19 | E | B | -2.3075 | |
| 20 | G | B | 0.0000 | |
| 21 | T | B | -1.2657 | |
| 22 | T | B | -1.6512 | |
| 23 | R | B | -2.3415 | |
| 24 | E | B | -3.0888 | |
| 25 | E | B | -3.2017 | |
| 26 | A | B | 0.0000 | |
| 27 | I | B | -3.1949 | |
| 28 | E | B | -3.6635 | |
| 29 | A | B | 0.0000 | |
| 30 | A | B | 0.0000 | |
| 31 | R | B | -3.4693 | |
| 32 | K | B | -2.7384 | |
| 33 | V | B | 0.0000 | |
| 34 | G | B | 0.0000 | |
| 35 | A | B | -0.6274 | |
| 36 | V | B | 0.3986 | |
| 37 | A | B | 0.0000 | |
| 38 | G | B | 0.1546 | |
| 39 | T | B | 0.5120 | |
| 40 | S | B | 0.5449 | |
| 41 | P | B | 0.5122 | |
| 42 | L | B | 0.6984 | |
| 43 | P | B | -0.5051 | |
| 44 | V | B | 0.0000 | |
| 45 | T | B | -1.6275 | |
| 46 | I | B | 0.0000 | |
| 47 | K | B | -1.2531 | |
| 48 | V | B | 0.0000 | |
| 49 | Y | B | -1.3448 | |
| 50 | V | B | 0.0000 | |
| 51 | D | B | -2.2915 | |
| 52 | G | B | -1.9565 | |
| 53 | E | B | -2.0586 | |
| 54 | L | B | -0.7314 | |
| 55 | I | B | -0.9798 | |
| 56 | A | B | 0.0000 | |
| 57 | E | B | -2.6103 | |
| 58 | A | B | -2.5705 | |
| 59 | E | B | -2.4773 | |
| 60 | G | B | -0.9184 | |
| 61 | A | B | -0.0068 | |
| 62 | G | B | 0.8768 | |
| 63 | V | B | 1.2473 | |
| 64 | G | B | -0.2098 | |
| 65 | A | B | 0.0000 | |
| 66 | P | B | -1.8321 | |
| 67 | K | B | -2.5587 | |
| 68 | A | B | 0.0000 | |
| 69 | A | B | 0.0000 | |
| 70 | E | B | -2.9326 | |
| 71 | E | B | -3.3276 | |
| 72 | A | B | 0.0000 | |
| 73 | V | B | 0.0000 | |
| 74 | E | B | -3.1347 | |
| 75 | E | B | -3.5859 | |
| 76 | A | B | 0.0000 | |
| 77 | F | B | -1.8039 | |
| 78 | E | B | -2.8053 | |
| 79 | K | B | -2.2488 | |
| 80 | L | B | 0.0415 |