| Chain sequence(s) |
A: CCDMAENMCLALCCDMAENMCLALCCDMAELLALCCDMAELLALCCDGAENMCLALCCDGAENMCLALCCDGAELLALCCDGAELLALCCGAENMCLALCCGAENMCLALCCGAELLALCCGAELLAL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.6930 | |
| 2 | C | A | 0.4513 | |
| 3 | D | A | -0.9932 | |
| 4 | M | A | -0.0160 | |
| 5 | A | A | -0.8573 | |
| 6 | E | A | -2.3257 | |
| 7 | N | A | -1.4697 | |
| 8 | M | A | 0.6199 | |
| 9 | C | A | 1.5530 | |
| 10 | L | A | 1.8353 | |
| 11 | A | A | 1.6742 | |
| 12 | L | A | 1.7211 | |
| 13 | C | A | 1.1190 | |
| 14 | C | A | 0.1146 | |
| 15 | D | A | -1.4103 | |
| 16 | M | A | -0.2674 | |
| 17 | A | A | -0.9245 | |
| 18 | E | A | -2.3095 | |
| 19 | N | A | -1.9583 | |
| 20 | M | A | -0.0839 | |
| 21 | C | A | 1.1544 | |
| 22 | L | A | 1.6804 | |
| 23 | A | A | 1.5727 | |
| 24 | L | A | 1.7544 | |
| 25 | C | A | 1.3903 | |
| 26 | C | A | 0.4158 | |
| 27 | D | A | -1.4144 | |
| 28 | M | A | 0.2871 | |
| 29 | A | A | -0.1011 | |
| 30 | E | A | -0.5298 | |
| 31 | L | A | 1.7147 | |
| 32 | L | A | 2.3765 | |
| 33 | A | A | 1.7737 | |
| 34 | L | A | 2.3986 | |
| 35 | C | A | 1.4492 | |
| 36 | C | A | 0.6621 | |
| 37 | D | A | -0.9156 | |
| 38 | M | A | -0.1137 | |
| 39 | A | A | -0.5566 | |
| 40 | E | A | -1.1676 | |
| 41 | L | A | 0.8458 | |
| 42 | L | A | 1.3321 | |
| 43 | A | A | 1.6252 | |
| 44 | L | A | 1.9349 | |
| 45 | C | A | 1.4126 | |
| 46 | C | A | -0.1399 | |
| 47 | D | A | -2.1832 | |
| 48 | G | A | -1.7782 | |
| 49 | A | A | -1.9637 | |
| 50 | E | A | -3.2341 | |
| 51 | N | A | -2.4851 | |
| 52 | M | A | -0.8165 | |
| 53 | C | A | 0.6558 | |
| 54 | L | A | 0.0000 | |
| 55 | A | A | 1.2730 | |
| 56 | L | A | 0.8277 | |
| 57 | C | A | 0.4489 | |
| 58 | C | A | -0.4764 | |
| 59 | D | A | -2.1381 | |
| 60 | G | A | -1.7118 | |
| 61 | A | A | -1.9051 | |
| 62 | E | A | -2.5222 | |
| 63 | N | A | -1.8860 | |
| 64 | M | A | 0.0145 | |
| 65 | C | A | 0.7372 | |
| 66 | L | A | 1.0894 | |
| 67 | A | A | 0.9126 | |
| 68 | L | A | 0.6788 | |
| 69 | C | A | 0.5006 | |
| 70 | C | A | 0.0000 | |
| 71 | D | A | -2.7996 | |
| 72 | G | A | -2.3418 | |
| 73 | A | A | -1.7471 | |
| 74 | E | A | -1.3615 | |
| 75 | L | A | 0.5469 | |
| 76 | L | A | 1.7462 | |
| 77 | A | A | 1.7776 | |
| 78 | L | A | 1.5348 | |
| 79 | C | A | 0.8019 | |
| 80 | C | A | 0.0294 | |
| 81 | D | A | -1.6658 | |
| 82 | G | A | -1.4652 | |
| 83 | A | A | -1.1146 | |
| 84 | E | A | -1.3205 | |
| 85 | L | A | 0.4826 | |
| 86 | L | A | 1.2228 | |
| 87 | A | A | 1.2578 | |
| 88 | L | A | 1.2513 | |
| 89 | C | A | 0.8111 | |
| 90 | C | A | -0.4364 | |
| 91 | G | A | -1.4898 | |
| 92 | A | A | -1.1514 | |
| 93 | E | A | -2.3837 | |
| 94 | N | A | -1.5932 | |
| 95 | M | A | 0.2281 | |
| 96 | C | A | 1.1672 | |
| 97 | L | A | 1.5693 | |
| 98 | A | A | 1.2689 | |
| 99 | L | A | 1.1173 | |
| 100 | C | A | 0.5043 | |
| 101 | C | A | -0.2591 | |
| 102 | G | A | -1.1959 | |
| 103 | A | A | -1.3441 | |
| 104 | E | A | -2.1991 | |
| 105 | N | A | -1.6939 | |
| 106 | M | A | -0.0689 | |
| 107 | C | A | 1.2092 | |
| 108 | L | A | 1.5712 | |
| 109 | A | A | 1.5895 | |
| 110 | L | A | 1.8302 | |
| 111 | C | A | 1.4115 | |
| 112 | C | A | 0.6125 | |
| 113 | G | A | -0.7090 | |
| 114 | A | A | -0.7008 | |
| 115 | E | A | -0.6569 | |
| 116 | L | A | 1.6237 | |
| 117 | L | A | 2.6356 | |
| 118 | A | A | 2.2289 | |
| 119 | L | A | 2.6050 | |
| 120 | C | A | 1.8959 | |
| 121 | C | A | 1.2296 | |
| 122 | G | A | -0.3863 | |
| 123 | A | A | -0.2143 | |
| 124 | E | A | -0.5043 | |
| 125 | L | A | 1.9698 | |
| 126 | L | A | 2.5535 | |
| 127 | A | A | 2.1138 | |
| 128 | L | A | 2.4348 |