| Chain sequence(s) |
A: LPAPKNLVVSEVTEDSLRLSVVTYDRDGYDSFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAEFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.4005 | |
| 2 | P | A | 0.1661 | |
| 3 | A | A | 0.1154 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.7848 | |
| 6 | N | A | -1.1266 | |
| 7 | L | A | 0.0000 | |
| 8 | V | A | 0.7930 | |
| 9 | V | A | -0.2465 | |
| 10 | S | A | -0.8390 | |
| 11 | E | A | -1.8931 | |
| 12 | V | A | -1.0732 | |
| 13 | T | A | -1.8182 | |
| 14 | E | A | -2.9030 | |
| 15 | D | A | -2.8872 | |
| 16 | S | A | -2.2422 | |
| 17 | L | A | 0.0000 | |
| 18 | R | A | -1.7880 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.4470 | |
| 21 | V | A | 0.0000 | |
| 22 | V | A | -0.5277 | |
| 23 | T | A | -1.3550 | |
| 24 | Y | A | -0.7214 | |
| 25 | D | A | -2.7964 | |
| 26 | R | A | -3.4634 | |
| 27 | D | A | -3.6212 | |
| 28 | G | A | -2.3282 | |
| 29 | Y | A | 0.0000 | |
| 30 | D | A | -2.4739 | |
| 31 | S | A | -1.7721 | |
| 32 | F | A | 0.0000 | |
| 33 | L | A | -0.2100 | |
| 34 | I | A | 0.0000 | |
| 35 | Q | A | -0.4420 | |
| 36 | Y | A | -0.5159 | |
| 37 | Q | A | -1.3916 | |
| 38 | E | A | -2.0530 | |
| 39 | S | A | -2.0250 | |
| 40 | E | A | -2.5040 | |
| 41 | K | A | -1.8781 | |
| 42 | V | A | -0.0332 | |
| 43 | G | A | -0.8854 | |
| 44 | E | A | -2.0011 | |
| 45 | A | A | -0.8018 | |
| 46 | I | A | -0.1793 | |
| 47 | N | A | -0.8071 | |
| 48 | L | A | 0.1282 | |
| 49 | T | A | -0.0134 | |
| 50 | V | A | -0.4468 | |
| 51 | P | A | -0.9742 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -2.0840 | |
| 54 | E | A | -2.1746 | |
| 55 | R | A | -1.3084 | |
| 56 | S | A | -1.1160 | |
| 57 | Y | A | 0.0000 | |
| 58 | D | A | -2.3049 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.5856 | |
| 61 | G | A | -1.5324 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0279 | |
| 64 | P | A | -2.5480 | |
| 65 | G | A | -1.8742 | |
| 66 | T | A | -2.2386 | |
| 67 | E | A | -2.7235 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -1.4550 | |
| 70 | V | A | 0.0000 | |
| 71 | S | A | -0.2526 | |
| 72 | I | A | 0.0000 | |
| 73 | Y | A | 0.2127 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | H | A | -1.6406 | |
| 77 | N | A | -2.3198 | |
| 78 | V | A | -0.4480 | |
| 79 | Y | A | -0.2182 | |
| 80 | K | A | -2.2033 | |
| 81 | D | A | -2.5103 | |
| 82 | T | A | -1.7347 | |
| 83 | N | A | -2.4183 | |
| 84 | M | A | -1.0340 | |
| 85 | R | A | -1.3074 | |
| 86 | G | A | 0.1322 | |
| 87 | L | A | 1.2982 | |
| 88 | P | A | 0.6220 | |
| 89 | L | A | 0.0757 | |
| 90 | S | A | -0.3111 | |
| 91 | A | A | -0.7851 | |
| 92 | E | A | -2.1555 | |
| 93 | F | A | 0.0000 | |
| 94 | T | A | -1.6696 | |
| 95 | T | A | -1.9922 |