| Chain sequence(s) |
A: AITGDALVALPEGESVRIADIVPGARPNSDNAIDLKVLDRHGNPVLADRLFHSGEHPVYTVRTVEGLRVTGTANHPLLCLVDVAGVPTLLWKLIDEIKPGDYAVIQRSAFVPGLVRFLAQAIADELTDGRFYYAKVASVTDAGVQPVYSLRVDACDAAFITNGFVSHNTEAP
_: AMRY input PDB |
| Selected Chain(s) | A,_ |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:09)
[INFO] Main: Simulation completed successfully. (00:02:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.0448 | |
| 2 | I | A | 0.0000 | |
| 3 | T | A | 0.0000 | |
| 4 | G | A | -1.3704 | |
| 5 | D | A | -2.1926 | |
| 6 | A | A | 0.0000 | |
| 7 | L | A | -0.6743 | |
| 8 | V | A | 0.0000 | |
| 9 | A | A | 0.0000 | |
| 10 | L | A | -1.4123 | |
| 11 | P | A | -2.0819 | |
| 12 | E | A | -2.6406 | |
| 13 | G | A | -2.0229 | |
| 14 | E | A | -2.4939 | |
| 15 | S | A | -1.2929 | |
| 16 | V | A | -0.9076 | |
| 17 | R | A | -1.7933 | |
| 18 | I | A | 0.0000 | |
| 19 | A | A | -1.1473 | |
| 20 | D | A | -1.4512 | |
| 21 | I | A | -0.3072 | |
| 22 | V | A | -0.4406 | |
| 23 | P | A | -0.9429 | |
| 24 | G | A | -1.1221 | |
| 25 | A | A | -1.6658 | |
| 26 | R | A | -2.6459 | |
| 27 | P | A | -2.2972 | |
| 28 | N | A | -2.5266 | |
| 29 | S | A | -2.2596 | |
| 30 | D | A | -2.6401 | |
| 31 | N | A | -1.5563 | |
| 32 | A | A | -0.9979 | |
| 33 | I | A | -1.1458 | |
| 34 | D | A | -1.9666 | |
| 35 | L | A | -1.2077 | |
| 36 | K | A | -1.9665 | |
| 37 | V | A | 0.0000 | |
| 38 | L | A | 0.0000 | |
| 39 | D | A | 0.0000 | |
| 40 | R | A | -0.9708 | |
| 41 | H | A | -2.0569 | |
| 42 | G | A | -1.7316 | |
| 43 | N | A | -1.6192 | |
| 44 | P | A | -1.3887 | |
| 45 | V | A | -0.7364 | |
| 46 | L | A | -1.1082 | |
| 47 | A | A | 0.0000 | |
| 48 | D | A | -1.6177 | |
| 49 | R | A | -1.7399 | |
| 50 | L | A | 0.0000 | |
| 51 | F | A | 0.0000 | |
| 52 | H | A | 0.0000 | |
| 53 | S | A | 0.0000 | |
| 54 | G | A | 0.0000 | |
| 55 | E | A | -2.0011 | |
| 56 | H | A | -0.9408 | |
| 57 | P | A | -0.5197 | |
| 58 | V | A | 0.0000 | |
| 59 | Y | A | -0.7517 | |
| 60 | T | A | -1.0308 | |
| 61 | V | A | 0.0000 | |
| 62 | R | A | -2.0191 | |
| 63 | T | A | 0.0000 | |
| 64 | V | A | 0.2242 | |
| 65 | E | A | -1.0633 | |
| 66 | G | A | -1.1378 | |
| 67 | L | A | -1.2162 | |
| 68 | R | A | -2.3893 | |
| 69 | V | A | 0.0000 | |
| 70 | T | A | -1.0601 | |
| 71 | G | A | 0.0000 | |
| 72 | T | A | -0.9722 | |
| 73 | A | A | -1.7428 | |
| 74 | N | A | -1.5537 | |
| 75 | H | A | 0.0000 | |
| 76 | P | A | 0.0000 | |
| 77 | L | A | 0.0000 | |
| 78 | L | A | 0.0000 | |
| 79 | C | A | 0.0000 | |
| 80 | L | A | 0.0000 | |
| 81 | V | A | 0.2988 | |
| 82 | D | A | -0.5932 | |
| 83 | V | A | 1.2211 | |
| 84 | A | A | 0.5009 | |
| 85 | G | A | -0.2062 | |
| 86 | V | A | 0.7004 | |
| 87 | P | A | 0.0000 | |
| 88 | T | A | 0.4573 | |
| 89 | L | A | 0.5892 | |
| 90 | L | A | 1.0317 | |
| 91 | W | A | 0.4840 | |
| 92 | K | A | -0.8206 | |
| 93 | L | A | -1.2657 | |
| 94 | I | A | 0.0000 | |
| 95 | D | A | -3.0058 | |
| 96 | E | A | -3.0460 | |
| 97 | I | A | 0.0000 | |
| 98 | K | A | -2.6002 | |
| 99 | P | A | -1.2253 | |
| 100 | G | A | -0.8480 | |
| 101 | D | A | -1.3175 | |
| 102 | Y | A | -0.2086 | |
| 103 | A | A | 0.0000 | |
| 104 | V | A | 0.0000 | |
| 105 | I | A | 0.0000 | |
| 106 | Q | A | 0.0000 | |
| 107 | R | A | -1.4579 | |
| 108 | S | A | -1.2418 | |
| 109 | A | A | -0.3221 | |
| 110 | F | A | 1.3733 | |
| 133 | V | A | 1.4175 | |
| 134 | P | A | 0.2897 | |
| 135 | G | A | 0.1559 | |
| 136 | L | A | 0.0000 | |
| 137 | V | A | 1.7247 | |
| 138 | R | A | -0.2559 | |
| 139 | F | A | 1.0766 | |
| 140 | L | A | 1.7869 | |
| 149 | A | A | -0.2822 | |
| 150 | Q | A | -1.3419 | |
| 151 | A | A | -1.2607 | |
| 152 | I | A | -0.7081 | |
| 153 | A | A | -0.9207 | |
| 154 | D | A | -3.0523 | |
| 155 | E | A | -2.7986 | |
| 156 | L | A | 0.0000 | |
| 157 | T | A | -2.0070 | |
| 158 | D | A | -3.3930 | |
| 159 | G | A | -2.4663 | |
| 160 | R | A | -3.0048 | |
| 161 | F | A | 0.0000 | |
| 162 | Y | A | -0.2026 | |
| 163 | Y | A | 0.2440 | |
| 164 | A | A | 0.0000 | |
| 165 | K | A | -1.1268 | |
| 166 | V | A | 0.0000 | |
| 167 | A | A | -0.7130 | |
| 168 | S | A | -0.7821 | |
| 169 | V | A | -1.2974 | |
| 170 | T | A | -0.8580 | |
| 171 | D | A | -1.4940 | |
| 172 | A | A | -0.5772 | |
| 173 | G | A | -0.3190 | |
| 174 | V | A | 0.4507 | |
| 175 | Q | A | -0.5155 | |
| 176 | P | A | -1.0801 | |
| 177 | V | A | 0.0000 | |
| 178 | Y | A | -0.5231 | |
| 179 | S | A | 0.0000 | |
| 180 | L | A | 0.0000 | |
| 181 | R | A | -1.1828 | |
| 182 | V | A | -1.1935 | |
| 183 | D | A | -1.7593 | |
| 184 | A | A | -0.6106 | |
| 185 | C | A | 0.2044 | |
| 186 | D | A | -0.2610 | |
| 187 | A | A | -0.2356 | |
| 188 | A | A | 0.0000 | |
| 189 | F | A | 0.0000 | |
| 190 | I | A | 0.0000 | |
| 191 | T | A | 0.0000 | |
| 192 | N | A | -0.6326 | |
| 193 | G | A | 0.0000 | |
| 194 | F | A | 0.0000 | |
| 195 | V | A | 0.0000 | |
| 196 | S | A | 0.0000 | |
| 197 | H | A | 0.2228 | |
| 198 | N | A | 0.0000 | |
| 199 | T | A | 0.0000 | |
| 200 | E | A | -1.2337 | |
| 201 | A | A | -0.9481 | |
| 202 | P | A | -0.9256 | |
| 1A | A | _ | -0.0986 | |
| 1B | M | _ | 0.1921 | |
| 1C | R | _ | -1.0075 | |
| 1D | Y | _ | 0.1626 |