Project name: query_structure

Status: done

Started: 2026-03-16 23:51:13
Settings
Chain sequence(s) A: LQLREPSFPDVQHVVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVTE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:47)
Show buried residues

Minimal score value
-3.3432
Maximal score value
1.7385
Average score
-0.8302
Total score value
-68.0742

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 1.1569
2 Q A -0.3212
3 L A -0.0210
4 R A -2.0837
5 E A -2.4026
6 P A -1.3766
7 S A -0.6874
8 F A 0.2028
9 P A -0.3940
10 D A -1.4024
11 V A -0.1120
12 Q A -1.3124
13 H A -0.5379
14 V A 0.6580
15 V A 0.4292
16 L A 0.8367
17 I A -0.5953
18 H A -1.7823
19 K A -1.8222
20 V A 0.0000
21 I A 1.7140
22 L A 1.7385
23 G A 0.4361
24 S A -0.0308
25 P A -0.7647
26 A A -0.4946
27 H A -1.2820
28 R A -1.7082
29 A A -1.1476
30 G A -1.4260
31 L A 0.0000
32 R A -2.5349
33 P A -1.8103
34 G A -1.4800
35 D A 0.0000
36 V A -0.1336
37 I A 0.0000
38 L A 0.2679
39 A A -0.5753
40 I A 0.0000
41 G A -1.4421
42 E A -2.1843
43 Q A -1.3654
44 M A -0.3031
45 V A 0.0000
46 Q A -1.4038
47 N A -1.2682
48 A A -1.0480
49 E A -2.2293
50 D A -1.8557
51 V A -0.9203
52 Y A -0.6944
53 E A -2.2898
54 A A 0.0000
55 V A -1.2050
56 R A -2.1459
57 T A -1.3358
58 Q A -1.4311
59 S A -1.2672
60 Q A -1.4804
61 L A 0.0000
62 A A -0.3165
63 V A 0.0000
64 Q A -0.6489
65 I A 0.0000
66 R A -2.2251
67 R A -2.9941
68 G A -2.6324
69 R A -3.3432
70 E A -3.2534
71 T A -1.8839
72 L A -0.6565
73 T A 0.0137
74 L A 0.5805
75 Y A 0.7599
76 V A 0.0000
77 T A -0.7501
78 P A 0.0000
79 E A -1.6124
80 V A -0.0871
81 T A -0.8052
82 E A -1.5508
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Laboratory of Theory of Biopolymers 2018