| Chain sequence(s) |
A: MSHHHHHHSGFPEKPLYIYPYDAAYNLEFYLKYALVENEKDSEYYYNQLKKILPLYPLSPEELEKELKTVLERLKDPSRRYYGIKKFVELMTLALSKAYLYKKEGNYEKAKEYLEVAEKYLKEVEELIPKIEEIDPWDAKYLKSYIERLKELLEKVKENS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:12:27)
[INFO] Main: Simulation completed successfully. (00:12:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5649 | |
| 2 | S | A | -0.6063 | |
| 3 | H | A | -1.7302 | |
| 4 | H | A | -2.3319 | |
| 5 | H | A | -2.7157 | |
| 6 | H | A | -2.7463 | |
| 7 | H | A | -2.5358 | |
| 8 | H | A | -1.8929 | |
| 9 | S | A | -1.0570 | |
| 10 | G | A | -0.4798 | |
| 11 | F | A | 0.6661 | |
| 12 | P | A | -0.8983 | |
| 13 | E | A | -2.4914 | |
| 14 | K | A | -2.1541 | |
| 15 | P | A | -0.6642 | |
| 16 | L | A | 0.8339 | |
| 17 | Y | A | 1.9546 | |
| 18 | I | A | 2.4355 | |
| 19 | Y | A | 2.3483 | |
| 20 | P | A | 1.5153 | |
| 21 | Y | A | 1.5953 | |
| 22 | D | A | 0.6984 | |
| 23 | A | A | 0.5910 | |
| 24 | A | A | 0.0000 | |
| 25 | Y | A | 0.6889 | |
| 26 | N | A | 0.0000 | |
| 27 | L | A | 0.0000 | |
| 28 | E | A | -0.4140 | |
| 29 | F | A | 0.2499 | |
| 30 | Y | A | 0.0000 | |
| 31 | L | A | 0.0000 | |
| 32 | K | A | -1.1521 | |
| 33 | Y | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | L | A | 0.0000 | |
| 36 | V | A | -1.8138 | |
| 37 | E | A | -3.0352 | |
| 38 | N | A | -3.2192 | |
| 39 | E | A | -3.1513 | |
| 40 | K | A | -3.4278 | |
| 41 | D | A | -3.2123 | |
| 42 | S | A | -2.6797 | |
| 43 | E | A | -2.7192 | |
| 44 | Y | A | -1.1388 | |
| 45 | Y | A | -1.1196 | |
| 46 | Y | A | -1.5047 | |
| 47 | N | A | -1.7484 | |
| 48 | Q | A | -1.2939 | |
| 49 | L | A | 0.0000 | |
| 50 | K | A | -1.5891 | |
| 51 | K | A | -1.9623 | |
| 52 | I | A | -0.4785 | |
| 53 | L | A | 0.0000 | |
| 54 | P | A | 0.0921 | |
| 55 | L | A | 1.2846 | |
| 56 | Y | A | 1.0817 | |
| 57 | P | A | 0.2992 | |
| 58 | L | A | -0.3887 | |
| 59 | S | A | -1.4299 | |
| 60 | P | A | 0.0000 | |
| 61 | E | A | -3.3210 | |
| 62 | E | A | -3.1528 | |
| 63 | L | A | 0.0000 | |
| 64 | E | A | -3.3948 | |
| 65 | K | A | -3.9074 | |
| 66 | E | A | -3.0454 | |
| 67 | L | A | 0.0000 | |
| 68 | K | A | -3.4991 | |
| 69 | T | A | -2.4771 | |
| 70 | V | A | 0.0000 | |
| 71 | L | A | -2.5038 | |
| 72 | E | A | -3.3822 | |
| 73 | R | A | -2.6636 | |
| 74 | L | A | 0.0000 | |
| 75 | K | A | -3.3905 | |
| 76 | D | A | -2.6745 | |
| 77 | P | A | -1.1715 | |
| 78 | S | A | -1.0948 | |
| 79 | R | A | -1.4533 | |
| 80 | R | A | 0.0000 | |
| 81 | Y | A | 0.3400 | |
| 82 | Y | A | 0.4553 | |
| 83 | G | A | 0.0000 | |
| 84 | I | A | 0.0000 | |
| 85 | K | A | -0.9843 | |
| 86 | K | A | -1.2674 | |
| 87 | F | A | 0.0000 | |
| 88 | V | A | 0.0000 | |
| 89 | E | A | -1.1196 | |
| 90 | L | A | 0.0000 | |
| 91 | M | A | 0.0000 | |
| 92 | T | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | S | A | 0.0000 | |
| 97 | K | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | Y | A | 0.0000 | |
| 100 | L | A | 0.0000 | |
| 101 | Y | A | -1.7829 | |
| 102 | K | A | -2.3580 | |
| 103 | K | A | -2.7721 | |
| 104 | E | A | -2.8541 | |
| 105 | G | A | -2.2371 | |
| 106 | N | A | -2.2068 | |
| 107 | Y | A | -1.9641 | |
| 108 | E | A | -2.9232 | |
| 109 | K | A | -2.5324 | |
| 110 | A | A | 0.0000 | |
| 111 | K | A | -3.5883 | |
| 112 | E | A | -3.6249 | |
| 113 | Y | A | 0.0000 | |
| 114 | L | A | -2.5168 | |
| 115 | E | A | -3.1084 | |
| 116 | V | A | 0.0000 | |
| 117 | A | A | 0.0000 | |
| 118 | E | A | -2.8225 | |
| 119 | K | A | -3.3532 | |
| 120 | Y | A | 0.0000 | |
| 121 | L | A | 0.0000 | |
| 122 | K | A | -4.0568 | |
| 123 | E | A | -3.9435 | |
| 124 | V | A | 0.0000 | |
| 125 | E | A | -3.2696 | |
| 126 | E | A | -3.4764 | |
| 127 | L | A | -2.6190 | |
| 128 | I | A | 0.0000 | |
| 129 | P | A | -2.2492 | |
| 130 | K | A | -2.9719 | |
| 131 | I | A | 0.0000 | |
| 132 | E | A | -2.7003 | |
| 133 | E | A | -2.3436 | |
| 134 | I | A | 0.0598 | |
| 135 | D | A | -0.8247 | |
| 136 | P | A | -1.1467 | |
| 137 | W | A | 0.2536 | |
| 138 | D | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | K | A | -1.8883 | |
| 141 | Y | A | -0.4826 | |
| 142 | L | A | 0.0000 | |
| 143 | K | A | -2.1837 | |
| 144 | S | A | -1.5791 | |
| 145 | Y | A | -1.6007 | |
| 146 | I | A | 0.0000 | |
| 147 | E | A | -3.2116 | |
| 148 | R | A | -2.6363 | |
| 149 | L | A | 0.0000 | |
| 150 | K | A | -3.4112 | |
| 151 | E | A | -3.8244 | |
| 152 | L | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | E | A | -3.9165 | |
| 155 | K | A | -3.4783 | |
| 156 | V | A | 0.0000 | |
| 157 | K | A | -3.0187 | |
| 158 | E | A | -3.3197 | |
| 159 | N | A | -2.6452 | |
| 160 | S | A | -1.5580 |