| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGGGFASGSYYMGWFRQAPGKGRELVAWISGSGGTETYYADSVKGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAASSSTPRDVFDTSDYDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:53)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.5467 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.3732 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.2195 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.5264 | |
| 8 | G | A | -1.1307 | |
| 9 | G | A | -0.8024 | |
| 10 | G | A | -0.0905 | |
| 11 | L | A | 0.9199 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.4261 | |
| 14 | P | A | -1.6252 | |
| 15 | G | A | -1.4275 | |
| 16 | G | A | -0.9674 | |
| 17 | S | A | -1.2337 | |
| 18 | L | A | -0.9332 | |
| 19 | R | A | -2.1339 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3133 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.0210 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0903 | |
| 26 | G | A | -1.4790 | |
| 27 | G | A | -1.4088 | |
| 28 | G | A | -1.0483 | |
| 29 | F | A | 0.0000 | |
| 30 | A | A | -1.0817 | |
| 31 | S | A | -0.7052 | |
| 32 | G | A | 0.0000 | |
| 33 | S | A | -0.5125 | |
| 34 | Y | A | -0.3345 | |
| 35 | Y | A | -0.0236 | |
| 36 | M | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -1.7774 | |
| 42 | A | A | -1.6657 | |
| 43 | P | A | -1.1942 | |
| 44 | G | A | -1.6644 | |
| 45 | K | A | -2.7324 | |
| 46 | G | A | -2.3213 | |
| 47 | R | A | -2.1602 | |
| 48 | E | A | -1.8868 | |
| 49 | L | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | W | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | S | A | -0.7556 | |
| 57 | G | A | -1.1535 | |
| 58 | G | A | -1.1484 | |
| 59 | T | A | -1.2283 | |
| 60 | E | A | -1.8766 | |
| 61 | T | A | -0.6599 | |
| 62 | Y | A | -0.1293 | |
| 63 | Y | A | -0.5881 | |
| 64 | A | A | -1.0865 | |
| 65 | D | A | -2.3468 | |
| 66 | S | A | -1.6989 | |
| 67 | V | A | 0.0000 | |
| 68 | K | A | -2.4292 | |
| 69 | G | A | -1.6404 | |
| 70 | R | A | 0.0000 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.7522 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.6667 | |
| 75 | R | A | -1.0741 | |
| 76 | D | A | -1.7262 | |
| 77 | N | A | -1.6138 | |
| 78 | A | A | -1.3462 | |
| 79 | K | A | -2.3159 | |
| 80 | R | A | -1.8845 | |
| 81 | M | A | -0.9254 | |
| 82 | V | A | 0.0000 | |
| 83 | Y | A | -0.6138 | |
| 84 | L | A | 0.0000 | |
| 85 | Q | A | -1.2504 | |
| 86 | M | A | 0.0000 | |
| 87 | N | A | -1.3587 | |
| 88 | S | A | -1.1805 | |
| 89 | L | A | 0.0000 | |
| 90 | R | A | -2.2125 | |
| 91 | A | A | -1.7262 | |
| 92 | E | A | -2.2081 | |
| 93 | D | A | 0.0000 | |
| 94 | T | A | -0.8611 | |
| 95 | A | A | 0.0000 | |
| 96 | V | A | -0.5091 | |
| 97 | Y | A | 0.0000 | |
| 98 | Y | A | -0.2835 | |
| 99 | C | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | S | A | 0.0000 | |
| 103 | S | A | -0.8604 | |
| 104 | S | A | -0.7911 | |
| 105 | T | A | -0.7831 | |
| 106 | P | A | 0.0000 | |
| 107 | R | A | -2.4068 | |
| 108 | D | A | -1.7996 | |
| 109 | V | A | -0.2856 | |
| 110 | F | A | 0.3715 | |
| 111 | D | A | -0.9307 | |
| 112 | T | A | -0.8251 | |
| 113 | S | A | -0.9414 | |
| 114 | D | A | -1.3190 | |
| 115 | Y | A | 0.0000 | |
| 116 | D | A | -1.8861 | |
| 117 | Y | A | -1.0777 | |
| 118 | W | A | -0.1865 | |
| 119 | G | A | -0.0750 | |
| 120 | Q | A | -0.8307 | |
| 121 | G | A | -0.5017 | |
| 122 | T | A | -0.6784 | |
| 123 | Q | A | -1.0119 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | -0.3581 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -0.8437 | |
| 128 | S | A | -0.6007 |