| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYVITYGETGGWSGYQEFEVPGSKSTATISGLSPGVDYTITVYAYGYPYVKYNKSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:34)
[INFO] Main: Simulation completed successfully. (00:01:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7988 | |
| 2 | S | A | 0.5139 | |
| 3 | S | A | 0.0000 | |
| 4 | V | A | -0.1422 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.3423 | |
| 7 | K | A | -2.3794 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.7580 | |
| 10 | V | A | 0.1115 | |
| 11 | V | A | 1.5406 | |
| 12 | A | A | 0.8999 | |
| 13 | A | A | 0.3232 | |
| 14 | T | A | -0.1964 | |
| 15 | P | A | -0.8046 | |
| 16 | T | A | -0.5344 | |
| 17 | S | A | -0.3173 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7480 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.7747 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.7280 | |
| 24 | A | A | -0.7939 | |
| 25 | P | A | 0.2474 | |
| 26 | A | A | 0.5973 | |
| 27 | V | A | 0.7270 | |
| 28 | T | A | 0.1420 | |
| 29 | V | A | -0.0810 | |
| 30 | D | A | -0.5158 | |
| 31 | Y | A | -0.7158 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | -0.7734 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.6110 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.2091 | |
| 39 | T | A | -1.0084 | |
| 40 | G | A | -0.6264 | |
| 41 | G | A | -0.2298 | |
| 42 | W | A | 0.7799 | |
| 43 | S | A | -0.0465 | |
| 44 | G | A | -0.4348 | |
| 45 | Y | A | -0.2296 | |
| 46 | Q | A | -1.5011 | |
| 47 | E | A | -2.1408 | |
| 48 | F | A | -1.2146 | |
| 49 | E | A | -1.8090 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.3389 | |
| 52 | G | A | -1.2648 | |
| 53 | S | A | -1.2572 | |
| 54 | K | A | -2.0190 | |
| 55 | S | A | -1.1665 | |
| 56 | T | A | -0.6278 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2396 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4763 | |
| 61 | G | A | -0.6866 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.8594 | |
| 64 | P | A | -0.9971 | |
| 65 | G | A | -1.1005 | |
| 66 | V | A | -0.9686 | |
| 67 | D | A | -1.9147 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.8993 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.3717 | |
| 74 | A | A | 0.0000 | |
| 75 | Y | A | 0.5423 | |
| 76 | G | A | 0.0000 | |
| 77 | Y | A | 1.8115 | |
| 78 | P | A | 1.4055 | |
| 79 | Y | A | 2.2354 | |
| 80 | V | A | 2.0897 | |
| 81 | K | A | -0.1315 | |
| 82 | Y | A | -0.3983 | |
| 83 | N | A | -1.9964 | |
| 84 | K | A | -2.4138 | |
| 85 | S | A | -1.3284 | |
| 86 | P | A | -0.6491 | |
| 87 | I | A | -0.3538 | |
| 88 | S | A | -0.5384 | |
| 89 | I | A | -0.7106 | |
| 90 | N | A | -1.7602 | |
| 91 | Y | A | -1.5115 | |
| 92 | R | A | -2.3843 | |
| 93 | T | A | -1.3257 |