| Chain sequence(s) |
B: SAALQEMLARMEAAAALAAAWAARYPELRAHLEAARAHYQAQAARIRAAS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.5353 | |
| 2 | A | B | -0.6090 | |
| 3 | A | B | -0.5203 | |
| 4 | L | B | -0.8982 | |
| 5 | Q | B | -1.9284 | |
| 6 | E | B | -2.0598 | |
| 7 | M | B | -1.2766 | |
| 8 | L | B | -1.6228 | |
| 9 | A | B | -1.5298 | |
| 10 | R | B | -2.1312 | |
| 11 | M | B | -1.3858 | |
| 12 | E | B | -1.2257 | |
| 13 | A | B | -0.5628 | |
| 14 | A | B | -0.4075 | |
| 15 | A | B | -0.6081 | |
| 16 | A | B | 0.1917 | |
| 17 | L | B | 1.1655 | |
| 18 | A | B | 0.0000 | |
| 19 | A | B | -0.0664 | |
| 20 | A | B | 0.1929 | |
| 21 | W | B | 0.4057 | |
| 22 | A | B | 0.0000 | |
| 23 | A | B | -0.6710 | |
| 24 | R | B | -1.4762 | |
| 25 | Y | B | -0.5301 | |
| 26 | P | B | -1.2578 | |
| 27 | E | B | -1.9273 | |
| 28 | L | B | -0.9605 | |
| 29 | R | B | -1.6972 | |
| 30 | A | B | -1.3134 | |
| 31 | H | B | -1.6811 | |
| 32 | L | B | 0.0000 | |
| 33 | E | B | -1.6914 | |
| 34 | A | B | -1.3442 | |
| 35 | A | B | -1.2445 | |
| 36 | R | B | -1.6886 | |
| 37 | A | B | -1.3809 | |
| 38 | H | B | -1.5057 | |
| 39 | Y | B | -1.3842 | |
| 40 | Q | B | -1.5658 | |
| 41 | A | B | -1.5590 | |
| 42 | Q | B | -1.9061 | |
| 43 | A | B | 0.0000 | |
| 44 | A | B | -1.8383 | |
| 45 | R | B | -2.5490 | |
| 46 | I | B | 0.0000 | |
| 47 | R | B | -2.1038 | |
| 48 | A | B | -1.3712 | |
| 49 | A | B | -0.8986 | |
| 50 | S | B | -1.0285 |