| Chain sequence(s) |
A: IPCGESCVWLPCISSAIGCSCKSKVCYRNG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:21)
[INFO] Main: Simulation completed successfully. (00:00:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 0.7667 | |
| 2 | P | A | -0.0410 | |
| 3 | C | A | 0.1188 | |
| 4 | G | A | -0.2281 | |
| 5 | E | A | -0.2231 | |
| 6 | S | A | -0.0399 | |
| 7 | C | A | 0.0000 | |
| 8 | V | A | 0.9059 | |
| 9 | W | A | 1.7635 | |
| 10 | L | A | 1.8259 | |
| 11 | P | A | 1.0005 | |
| 12 | C | A | 0.0000 | |
| 13 | I | A | 2.2443 | |
| 14 | S | A | 1.1960 | |
| 15 | S | A | 0.8468 | |
| 16 | A | A | 1.2962 | |
| 17 | I | A | 1.8753 | |
| 18 | G | A | 0.2308 | |
| 19 | C | A | 0.0000 | |
| 20 | S | A | -0.6645 | |
| 21 | C | A | -0.6577 | |
| 22 | K | A | -2.1405 | |
| 23 | S | A | -1.4802 | |
| 24 | K | A | -1.4757 | |
| 25 | V | A | -0.7926 | |
| 26 | C | A | 0.0000 | |
| 27 | Y | A | -1.0319 | |
| 28 | R | A | -1.7496 | |
| 29 | N | A | -1.7664 | |
| 30 | G | A | -0.8359 |