Project name: 95d1786c97f27cd

Status: done

Started: 2026-06-22 16:05:32
Settings
Chain sequence(s) B: GSALLKELAARLNKAAEVLAQIAEQLAPEARAAADARIAELRKRAAELAA
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:59)
Show buried residues

Minimal score value
-4.1025
Maximal score value
0.9423
Average score
-1.5142
Total score value
-75.7094

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G B -0.7511
2 S B -0.1171
3 A B -0.0115
4 L B 0.9423
5 L B -0.1415
6 K B -1.5274
7 E B -1.5690
8 L B -0.7815
9 A B 0.0000
10 A B -1.9592
11 R B -2.9228
12 L B -2.2725
13 N B -2.7470
14 K B -2.5509
15 A B -1.3383
16 A B 0.0000
17 E B -1.4715
18 V B 0.7214
19 L B -0.2706
20 A B -1.2930
21 Q B -0.9917
22 I B 0.1357
23 A B 0.0000
24 E B -2.5572
25 Q B -1.7455
26 L B -0.9449
27 A B -1.1125
28 P B -1.6091
29 E B -2.0208
30 A B -1.6715
31 R B -2.2602
32 A B -1.6547
33 A B -1.5268
34 A B 0.0000
35 D B -2.8239
36 A B -2.0440
37 R B -3.1225
38 I B 0.0000
39 A B -2.6835
40 E B -3.4084
41 L B -3.1798
42 R B -3.7859
43 K B -4.1025
44 R B -3.6268
45 A B 0.0000
46 A B -2.4780
47 E B -2.9463
48 L B -1.4304
49 A B -1.1865
50 A B -0.8705
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018