Project name: 95d86423484090d

Status: done

Started: 2026-02-24 08:28:33
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Chain sequence(s) H: VKLLEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSS
L: ELVMTQSPSSLSASVGDRVNIACRASQGISSALAWYQQKPGKAPRLLIYDASNLESGVPSRFSGSGSGTDFTLTISSLQPEDFAIYYCQQFNSYPLTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:17)
Show buried residues

Minimal score value
-3.078
Maximal score value
1.6677
Average score
-0.5224
Total score value
-119.107

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V H 1.6677
2 K H 0.7864
3 L H 1.1184
4 L H 0.0000
5 E H -0.8507
6 Q H 0.0000
7 S H -0.8412
8 G H -0.6295
9 A H 0.3303
11 E H 0.0889
12 V H 1.0163
13 K H -0.8239
14 K H -1.9795
15 P H -1.8467
16 G H -1.2843
17 A H -1.0872
18 S H -1.1542
19 V H 0.0000
20 K H -1.8158
21 V H 0.0000
22 S H -0.7855
23 C H 0.0000
24 K H -0.8977
25 A H 0.0000
26 S H 0.0686
27 G H 0.2802
28 Y H 0.2301
29 S H -0.3181
30 F H 0.0000
35 T H -0.3844
36 S H -0.0373
37 Y H 0.2973
38 G H 0.0000
39 L H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6442
45 A H -1.0240
46 P H -1.1396
47 G H -1.3813
48 Q H -2.0950
49 R H -1.8716
50 L H 0.0000
51 E H -0.9475
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 W H 0.0000
56 I H 0.0000
57 S H -0.8152
58 A H 0.0000
59 G H -0.5819
62 T H -0.7277
63 G H -1.1236
64 N H -1.5780
65 T H -0.9480
66 K H -1.1091
67 Y H -0.9718
68 S H 0.0000
69 Q H -2.8802
70 K H -2.8662
71 F H 0.0000
72 R H -3.0780
74 G H -1.8927
75 R H -1.4145
76 V H 0.0000
77 T H -0.7222
78 F H 0.0000
79 T H -0.5265
80 R H -0.9020
81 D H -1.0483
82 T H -0.6679
83 S H -0.4933
84 A H -0.5202
85 T H -0.6057
86 T H 0.0000
87 A H 0.0000
88 Y H -0.5510
89 M H 0.0000
90 G H -0.8890
91 L H 0.0000
92 S H -0.8632
93 S H -0.9282
94 L H 0.0000
95 R H -1.9359
96 P H -1.8316
97 E H -2.1775
98 D H 0.0000
99 T H -0.4811
100 A H 0.0000
101 V H 0.7132
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 D H 0.0000
108 P H 0.4672
109 Y H 0.9203
110 G H 0.0822
111 G H -0.3864
112A G H 0.0000
112 K H -1.1716
113 S H 0.0000
114 E H 0.0000
115 F H 0.0000
116 D H 0.0000
117 Y H 0.3293
118 W H 0.0000
119 G H 0.0000
120 Q H -1.4760
121 G H -0.7558
122 T H 0.0000
123 L H 1.1430
124 V H 0.0000
125 T H 0.0845
126 V H 0.0000
127 S H -0.7409
128 S H -0.8566
1 E L -1.7017
2 L L 0.0000
3 V L 0.2306
4 M L 0.0000
5 T L -0.6873
6 Q L 0.0000
7 S L -0.8199
8 P L -0.6379
9 S L -0.5565
10 S L -0.6469
11 L L -0.7034
12 S L -0.8650
13 A L -0.8528
14 S L -0.5143
15 V L 0.4350
16 G L -0.5563
17 D L -1.6114
18 R L -2.4620
19 V L 0.0000
20 N L -1.8312
21 I L 0.0000
22 A L -1.0737
23 C L 0.0000
24 R L -2.4235
25 A L 0.0000
26 S L -1.2059
27 Q L -1.9741
28 G L -1.6739
29 I L 0.0000
36 S L -0.9808
37 S L -0.8127
38 A L -0.7699
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.4165
44 Q L 0.0000
45 K L -1.3008
46 P L -1.0429
47 G L -1.6159
48 K L -2.5179
49 A L -1.4346
50 P L 0.0000
51 R L -0.8040
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.1738
56 D L -0.9061
57 A L 0.0000
65 S L -0.7284
66 N L -0.6793
67 L L 0.0264
68 E L 0.0000
69 S L -0.3771
70 G L -0.5303
71 V L 0.0000
72 P L -0.3799
74 S L -0.3799
75 R L -0.7546
76 F L 0.0000
77 S L -0.5366
78 G L -0.5929
79 S L -0.8132
80 G L -1.1318
83 S L -1.2019
84 G L -1.3588
85 T L -1.8500
86 D L -2.1804
87 F L 0.0000
88 T L -1.0133
89 L L 0.0000
90 T L -1.0993
91 I L 0.0000
92 S L -1.4672
93 S L -1.0622
94 L L 0.0000
95 Q L -0.7049
96 P L -0.9272
97 E L -1.6046
98 D L 0.0000
99 F L -0.0422
100 A L 0.0000
101 I L -0.0064
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 F L 0.0000
108 N L -0.9816
109 S L -0.7613
114 Y L -0.3748
115 P L -0.8663
116 L L 0.0000
117 T L -0.2139
118 F L 0.0000
119 G L 0.0000
120 G L -0.8093
121 G L -0.7563
122 T L 0.0000
123 K L -0.6670
124 V L 0.0000
125 E L -0.8475
126 I L -0.4411
127 K L -1.3508
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Laboratory of Theory of Biopolymers 2018