| Chain sequence(s) |
L: KWLMLPISEAYGGD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 47 | K | L | -1.4865 | |
| 48 | W | L | 1.1626 | |
| 49 | L | L | 1.8354 | |
| 50 | M | L | 0.9250 | |
| 51 | L | L | 1.2772 | |
| 52 | P | L | 0.1293 | |
| 53 | I | L | 0.6149 | |
| 54 | S | L | -0.3582 | |
| 55 | E | L | -1.8483 | |
| 56 | A | L | -0.0318 | |
| 57 | Y | L | 1.2415 | |
| 58 | G | L | -0.2450 | |
| 59 | G | L | -0.5665 | |
| 60 | D | L | -1.6482 |