| Chain sequence(s) |
B: MEKLMQAKELLKEMKSRLAAAKTPEEVLELYREFVGVAREIGQLMAEAEA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 0.0089 | |
| 2 | E | B | -1.7065 | |
| 3 | K | B | -2.0096 | |
| 4 | L | B | -0.9361 | |
| 5 | M | B | -0.9843 | |
| 6 | Q | B | -2.0078 | |
| 7 | A | B | 0.0000 | |
| 8 | K | B | -2.8223 | |
| 9 | E | B | -3.5160 | |
| 10 | L | B | -2.2263 | |
| 11 | L | B | -2.2614 | |
| 12 | K | B | -4.0994 | |
| 13 | E | B | -3.8996 | |
| 14 | M | B | 0.0000 | |
| 15 | K | B | -3.0983 | |
| 16 | S | B | -2.3654 | |
| 17 | R | B | -2.3307 | |
| 18 | L | B | -1.3509 | |
| 19 | A | B | -1.0032 | |
| 20 | A | B | -0.9909 | |
| 21 | A | B | -1.7494 | |
| 22 | K | B | -2.2312 | |
| 23 | T | B | -1.8891 | |
| 24 | P | B | -1.7010 | |
| 25 | E | B | -2.5672 | |
| 26 | E | B | -2.6382 | |
| 27 | V | B | -1.1793 | |
| 28 | L | B | -0.6566 | |
| 29 | E | B | -2.3067 | |
| 30 | L | B | 0.0000 | |
| 31 | Y | B | 0.3484 | |
| 32 | R | B | -1.3333 | |
| 33 | E | B | -0.6910 | |
| 34 | F | B | 0.3165 | |
| 35 | V | B | 0.4247 | |
| 36 | G | B | -0.7843 | |
| 37 | V | B | -0.5397 | |
| 38 | A | B | -0.7589 | |
| 39 | R | B | -2.3609 | |
| 40 | E | B | -2.2524 | |
| 41 | I | B | -1.6865 | |
| 42 | G | B | -1.7382 | |
| 43 | Q | B | -2.5327 | |
| 44 | L | B | -1.7854 | |
| 45 | M | B | -1.1190 | |
| 46 | A | B | -1.5411 | |
| 47 | E | B | -2.0032 | |
| 48 | A | B | -1.6337 | |
| 49 | E | B | -2.0655 | |
| 50 | A | B | -1.1526 |