| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIIKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPQHCGADDRVNFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPEGHPLPAAPPPSPLYVPPPPSSPYAVLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPFPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9474 | |
| 2 | L | A | 1.9686 | |
| 3 | P | A | 0.6509 | |
| 4 | P | A | 0.3727 | |
| 5 | T | A | 0.1221 | |
| 6 | T | A | 0.1346 | |
| 7 | P | A | 0.1854 | |
| 8 | V | A | 1.2149 | |
| 9 | A | A | 0.0317 | |
| 10 | K | A | -1.1511 | |
| 11 | V | A | -0.4057 | |
| 12 | Q | A | -1.5274 | |
| 13 | S | A | -1.5943 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3982 | |
| 16 | E | A | -2.4310 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4595 | |
| 20 | P | A | 0.1089 | |
| 21 | T | A | 0.1156 | |
| 22 | S | A | -0.1682 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0859 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1705 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7605 | |
| 31 | R | A | -2.6159 | |
| 32 | L | A | -0.7455 | |
| 33 | L | A | 1.1763 | |
| 34 | T | A | 1.5344 | |
| 35 | V | A | 1.7932 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2055 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6302 | |
| 40 | E | A | -1.6245 | |
| 41 | D | A | -0.7163 | |
| 42 | I | A | 1.0429 | |
| 43 | I | A | 1.2938 | |
| 44 | K | A | -1.0376 | |
| 45 | N | A | -1.8714 | |
| 46 | G | A | -1.1670 | |
| 47 | K | A | -0.8518 | |
| 48 | V | A | 1.5966 | |
| 49 | V | A | 2.1518 | |
| 50 | V | A | 1.3597 | |
| 51 | P | A | 0.5412 | |
| 52 | K | A | -0.6132 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1379 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3715 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2708 | |
| 70 | K | A | -1.8134 | |
| 71 | F | A | -0.6671 | |
| 72 | A | A | -0.5809 | |
| 73 | L | A | -0.8702 | |
| 74 | P | A | -1.2643 | |
| 75 | Q | A | -2.4789 | |
| 76 | K | A | -3.0939 | |
| 77 | D | A | -2.9870 | |
| 78 | F | A | -1.6433 | |
| 79 | Y | A | -1.9142 | |
| 80 | D | A | -2.7474 | |
| 81 | P | A | -2.3469 | |
| 82 | E | A | -3.0668 | |
| 83 | K | A | -3.4410 | |
| 84 | E | A | -2.5023 | |
| 85 | R | A | -1.3132 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6371 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9565 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3084 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6802 | |
| 99 | G | A | -0.5494 | |
| 100 | P | A | -0.4302 | |
| 101 | L | A | -0.0019 | |
| 102 | G | A | -0.2620 | |
| 103 | K | A | -0.7067 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4598 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1146 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1992 | |
| 110 | L | A | -0.1939 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2878 | |
| 113 | K | A | -0.3878 | |
| 114 | L | A | -0.9682 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5756 | |
| 117 | T | A | -1.3901 | |
| 118 | E | A | -2.7247 | |
| 119 | N | A | -2.4240 | |
| 120 | P | A | -1.7497 | |
| 121 | T | A | -0.9202 | |
| 122 | A | A | -0.6829 | |
| 123 | P | A | -0.5612 | |
| 124 | Q | A | -1.2284 | |
| 125 | H | A | -0.8312 | |
| 126 | C | A | -0.9905 | |
| 127 | G | A | -1.3351 | |
| 128 | A | A | -1.2590 | |
| 129 | D | A | -2.1689 | |
| 130 | D | A | -1.7783 | |
| 131 | R | A | -1.4337 | |
| 132 | V | A | -0.5108 | |
| 133 | N | A | -0.9152 | |
| 134 | F | A | -0.3984 | |
| 135 | S | A | -0.3694 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6945 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5604 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2494 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1018 | |
| 157 | D | A | 0.3424 | |
| 158 | I | A | 0.8494 | |
| 159 | A | A | 0.1132 | |
| 160 | E | A | -1.4826 | |
| 161 | P | A | -0.2622 | |
| 162 | C | A | 0.1646 | |
| 163 | P | A | -0.1827 | |
| 164 | G | A | -0.0881 | |
| 165 | L | A | 0.5650 | |
| 166 | P | A | -0.1208 | |
| 167 | P | A | -0.3438 | |
| 168 | G | A | -0.4187 | |
| 169 | A | A | -0.0159 | |
| 170 | C | A | 0.7527 | |
| 171 | P | A | 0.5437 | |
| 172 | P | A | 0.7738 | |
| 173 | I | A | 2.0324 | |
| 174 | Q | A | 0.8326 | |
| 175 | L | A | 1.4220 | |
| 176 | V | A | 0.8037 | |
| 177 | N | A | -0.3275 | |
| 178 | S | A | 0.0088 | |
| 179 | V | A | 0.4134 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3736 | |
| 182 | D | A | 0.0708 | |
| 183 | G | A | -0.1616 | |
| 184 | D | A | -0.5899 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4880 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1003 | |
| 190 | F | A | 0.0136 | |
| 191 | G | A | -0.1621 | |
| 192 | N | A | -0.3489 | |
| 193 | M | A | -0.1948 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4049 | |
| 197 | E | A | -2.5996 | |
| 198 | L | A | -1.2203 | |
| 199 | Q | A | -2.5385 | |
| 200 | Q | A | -3.3329 | |
| 201 | D | A | -3.5974 | |
| 202 | R | A | -3.3411 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1574 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3945 | |
| 211 | S | A | -1.9219 | |
| 212 | T | A | -1.4969 | |
| 213 | R | A | -2.2204 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2244 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3226 | |
| 220 | L | A | 0.5173 | |
| 221 | K | A | -1.2781 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8747 | |
| 224 | N | A | -1.6438 | |
| 225 | E | A | -1.3150 | |
| 226 | A | A | -0.6745 | |
| 227 | Y | A | -0.4069 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6966 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0950 | |
| 234 | F | A | 0.2728 | |
| 235 | G | A | -0.8005 | |
| 236 | R | A | -2.5763 | |
| 237 | R | A | -2.8081 | |
| 238 | E | A | -2.0689 | |
| 239 | Q | A | -0.0839 | |
| 240 | V | A | 1.5668 | |
| 241 | Y | A | 1.2512 | |
| 242 | A | A | 0.1542 | |
| 243 | R | A | -1.3537 | |
| 244 | H | A | -1.2310 | |
| 245 | F | A | -0.2743 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5355 | |
| 249 | C | A | -0.9762 | |
| 250 | G | A | -0.9140 | |
| 251 | P | A | -0.8818 | |
| 252 | E | A | -1.3405 | |
| 253 | G | A | -1.2703 | |
| 254 | H | A | -1.4524 | |
| 255 | P | A | -0.8758 | |
| 256 | L | A | 0.3399 | |
| 257 | P | A | 0.0104 | |
| 258 | A | A | 0.1911 | |
| 259 | A | A | 0.2452 | |
| 260 | P | A | -0.2778 | |
| 261 | P | A | 0.0032 | |
| 262 | P | A | 0.0619 | |
| 263 | S | A | 0.5573 | |
| 264 | P | A | 0.6788 | |
| 265 | L | A | 1.8824 | |
| 266 | Y | A | 1.7417 | |
| 267 | V | A | 1.9251 | |
| 268 | P | A | 0.9700 | |
| 269 | P | A | 0.6210 | |
| 270 | P | A | -0.1879 | |
| 271 | P | A | -0.1748 | |
| 272 | S | A | -0.3490 | |
| 273 | S | A | 0.1479 | |
| 274 | P | A | 0.2755 | |
| 275 | Y | A | 1.2506 | |
| 276 | A | A | 1.2090 | |
| 277 | V | A | 2.1700 | |
| 278 | L | A | 1.6118 | |
| 279 | P | A | 0.3086 | |
| 280 | S | A | -0.2432 | |
| 281 | T | A | -0.2788 | |
| 282 | D | A | -0.9029 | |
| 283 | Y | A | 0.8361 | |
| 284 | F | A | 0.6875 | |
| 285 | G | A | 0.1074 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9482 | |
| 291 | L | A | 1.6457 | |
| 292 | V | A | 0.6596 | |
| 293 | S | A | -0.1407 | |
| 294 | S | A | -0.9637 | |
| 295 | D | A | -1.8367 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1003 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6180 | |
| 301 | R | A | -1.8468 | |
| 302 | P | A | -0.9432 | |
| 303 | F | A | -0.1484 | |
| 304 | W | A | -0.5091 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0804 | |
| 307 | R | A | -2.8218 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3595 | |
| 310 | G | A | -1.2149 | |
| 311 | N | A | -1.3019 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9780 | |
| 319 | N | A | -0.9028 | |
| 320 | E | A | -1.0587 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3729 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1246 | |
| 333 | N | A | 0.5076 | |
| 334 | F | A | 1.7109 | |
| 335 | T | A | 0.7503 | |
| 336 | I | A | 0.4359 | |
| 337 | S | A | -0.8509 | |
| 338 | Q | A | -1.4716 | |
| 339 | Q | A | -0.4299 | |
| 340 | L | A | 1.0806 | |
| 341 | C | A | 0.9383 | |
| 342 | T | A | 0.7928 | |
| 343 | P | A | 0.6600 | |
| 344 | F | A | 2.0351 | |
| 345 | P | A | 1.1661 | |
| 346 | N | A | 0.2056 | |
| 347 | V | A | 1.8254 | |
| 348 | Y | A | 1.6635 | |
| 349 | D | A | 0.0299 | |
| 350 | P | A | -0.3795 | |
| 351 | S | A | -0.3123 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.6966 | |
| 354 | K | A | -1.7451 | |
| 355 | N | A | -1.7320 | |
| 356 | Y | A | -0.0870 | |
| 357 | L | A | 0.6505 | |
| 358 | R | A | 0.9538 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3344 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0297 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9185 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6732 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2795 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3284 | |
| 376 | L | A | -1.7571 | |
| 377 | D | A | -2.0405 | |
| 378 | P | A | -1.0663 | |
| 379 | G | A | -1.0224 | |
| 380 | V | A | -0.9330 | |
| 381 | L | A | -0.5432 | |
| 382 | A | A | -0.6598 | |
| 383 | H | A | -0.8481 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4001 | |
| 386 | T | A | -0.5715 | |
| 387 | M | A | -0.3290 | |
| 388 | N | A | -0.8705 | |
| 389 | P | A | -1.2961 | |
| 390 | T | A | -1.6390 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5881 | |
| 393 | E | A | -3.0371 | |
| 394 | N | A | -2.8189 | |
| 395 | W | A | -1.5983 | |
| 396 | N | A | -1.2153 | |
| 397 | L | A | -0.2287 | |
| 398 | G | A | 0.5229 | |
| 399 | F | A | 2.4257 | |
| 400 | V | A | 1.8565 | |
| 401 | P | A | 0.0597 | |
| 402 | P | A | -2.0123 | |
| 403 | K | A | -3.5753 | |
| 404 | E | A | -4.1335 | |
| 405 | R | A | -4.7220 | |
| 406 | E | A | -4.1547 | |
| 407 | D | A | -3.0384 | |
| 408 | P | A | -1.8604 | |
| 409 | Y | A | -0.9820 | |
| 410 | K | A | -2.1003 | |
| 411 | G | A | -0.6381 | |
| 412 | L | A | 0.6639 | |
| 413 | I | A | 1.5805 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3932 | |
| 416 | E | A | -1.6629 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8450 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8956 | |
| 421 | E | A | -2.5029 | |
| 422 | R | A | -2.0741 | |
| 423 | F | A | -1.0221 | |
| 424 | S | A | -1.3182 | |
| 425 | Q | A | -1.8363 | |
| 426 | D | A | -2.8772 | |
| 427 | L | A | -1.9683 | |
| 428 | D | A | -2.7500 | |
| 429 | Q | A | -2.5984 | |
| 430 | F | A | -1.4217 | |
| 431 | A | A | -0.8753 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5158 | |
| 435 | K | A | -0.6817 | |
| 436 | F | A | 0.1817 | |
| 437 | L | A | 1.0547 | |
| 438 | Y | A | 0.8451 | |
| 439 | Q | A | -0.2538 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine