| Chain sequence(s) |
A: ACKGVFDACTPGKNECCPNRVCSDKHKWCKWKL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:34)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.2028 | |
| 2 | C | A | -1.0352 | |
| 3 | K | A | -1.7160 | |
| 4 | G | A | -0.6609 | |
| 5 | V | A | 1.0306 | |
| 6 | F | A | 1.6042 | |
| 7 | D | A | 0.0242 | |
| 8 | A | A | -0.5783 | |
| 9 | C | A | -1.2666 | |
| 10 | T | A | -1.7181 | |
| 11 | P | A | -1.9625 | |
| 12 | G | A | -2.0700 | |
| 13 | K | A | -3.0246 | |
| 14 | N | A | -2.8796 | |
| 15 | E | A | -2.8941 | |
| 16 | C | A | -1.6538 | |
| 17 | C | A | -1.1273 | |
| 18 | P | A | -1.2220 | |
| 19 | N | A | -1.3170 | |
| 20 | R | A | -0.7551 | |
| 21 | V | A | -0.4770 | |
| 22 | C | A | -1.4211 | |
| 23 | S | A | -1.9530 | |
| 24 | D | A | -3.4701 | |
| 25 | K | A | -3.4323 | |
| 26 | H | A | -2.7263 | |
| 27 | K | A | -2.9807 | |
| 28 | W | A | -0.6755 | |
| 29 | C | A | 0.0000 | |
| 30 | K | A | 0.4124 | |
| 31 | W | A | 0.7462 | |
| 32 | K | A | -0.6817 | |
| 33 | L | A | 0.8400 |