| Chain sequence(s) |
A: MAQVQLVEKGGGKVRAGGKLRLRCTASGGSEYSYSTFSLGWFRQAPGQEREAVAAIASMGGLTYYADSVKGRFKIKRDNAKNTVTLRMNNLKPEDTAIYYCAAVRGYFMRLPSSHNFRYWGQGTRVTVSR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:42)
[INFO] Main: Simulation completed successfully. (00:03:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6949 | |
| 2 | A | A | -0.3570 | |
| 3 | Q | A | -1.2559 | |
| 4 | V | A | -1.1184 | |
| 5 | Q | A | -1.4948 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | -0.6102 | |
| 8 | E | A | 0.0000 | |
| 9 | K | A | -2.7232 | |
| 10 | G | A | -2.5005 | |
| 11 | G | A | -2.2418 | |
| 12 | G | A | -2.0075 | |
| 13 | K | A | -2.3845 | |
| 14 | V | A | -2.2050 | |
| 15 | R | A | -3.2075 | |
| 16 | A | A | -2.8652 | |
| 17 | G | A | -2.1839 | |
| 18 | G | A | -2.3782 | |
| 19 | K | A | -3.3279 | |
| 20 | L | A | -2.6714 | |
| 21 | R | A | -3.5025 | |
| 22 | L | A | 0.0000 | |
| 23 | R | A | -2.5557 | |
| 24 | C | A | 0.0000 | |
| 25 | T | A | -1.0471 | |
| 26 | A | A | -0.6342 | |
| 27 | S | A | -0.8229 | |
| 28 | G | A | -1.3880 | |
| 29 | G | A | -1.4545 | |
| 30 | S | A | -1.3759 | |
| 31 | E | A | -2.0696 | |
| 32 | Y | A | -1.5725 | |
| 33 | S | A | -1.1618 | |
| 34 | Y | A | 0.0000 | |
| 35 | S | A | -0.1295 | |
| 36 | T | A | -0.3756 | |
| 37 | F | A | 0.0000 | |
| 38 | S | A | 0.0000 | |
| 39 | L | A | 0.0000 | |
| 40 | G | A | 0.0000 | |
| 41 | W | A | 0.0000 | |
| 42 | F | A | 0.0000 | |
| 43 | R | A | -1.1041 | |
| 44 | Q | A | -1.6358 | |
| 45 | A | A | -1.6785 | |
| 46 | P | A | -1.1429 | |
| 47 | G | A | -1.6667 | |
| 48 | Q | A | -2.7145 | |
| 49 | E | A | -3.0921 | |
| 50 | R | A | -2.2285 | |
| 51 | E | A | -1.6738 | |
| 52 | A | A | 0.0000 | |
| 53 | V | A | 0.0000 | |
| 54 | A | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | I | A | 0.0000 | |
| 57 | A | A | 0.0000 | |
| 58 | S | A | 0.0000 | |
| 59 | M | A | 1.0110 | |
| 60 | G | A | 0.2264 | |
| 61 | G | A | 0.4794 | |
| 62 | L | A | 1.3432 | |
| 63 | T | A | 0.3532 | |
| 64 | Y | A | 0.1518 | |
| 65 | Y | A | -0.9321 | |
| 66 | A | A | 0.0000 | |
| 67 | D | A | -2.4265 | |
| 68 | S | A | -1.8294 | |
| 69 | V | A | 0.0000 | |
| 70 | K | A | -2.7397 | |
| 71 | G | A | -2.1571 | |
| 72 | R | A | -2.4808 | |
| 73 | F | A | 0.0000 | |
| 74 | K | A | -2.5437 | |
| 75 | I | A | 0.0000 | |
| 76 | K | A | -1.9871 | |
| 77 | R | A | 0.0000 | |
| 78 | D | A | -1.4707 | |
| 79 | N | A | -1.5172 | |
| 80 | A | A | -1.3316 | |
| 81 | K | A | -2.1496 | |
| 82 | N | A | -1.4675 | |
| 83 | T | A | -1.3988 | |
| 84 | V | A | 0.0000 | |
| 85 | T | A | -2.0927 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -3.2090 | |
| 88 | M | A | 0.0000 | |
| 89 | N | A | -3.2362 | |
| 90 | N | A | -2.8008 | |
| 91 | L | A | 0.0000 | |
| 92 | K | A | -2.8507 | |
| 93 | P | A | -2.1360 | |
| 94 | E | A | -2.1993 | |
| 95 | D | A | 0.0000 | |
| 96 | T | A | -1.2895 | |
| 97 | A | A | 0.0000 | |
| 98 | I | A | -0.4333 | |
| 99 | Y | A | 0.0000 | |
| 100 | Y | A | -0.3346 | |
| 101 | C | A | 0.0000 | |
| 102 | A | A | 0.0000 | |
| 103 | A | A | 0.0000 | |
| 104 | V | A | -1.1989 | |
| 105 | R | A | -1.7062 | |
| 106 | G | A | 0.3978 | |
| 107 | Y | A | 1.9251 | |
| 108 | F | A | 1.7159 | |
| 109 | M | A | 0.6796 | |
| 110 | R | A | -1.1698 | |
| 111 | L | A | -0.7528 | |
| 112 | P | A | -0.9534 | |
| 113 | S | A | -1.3442 | |
| 114 | S | A | -1.6501 | |
| 115 | H | A | -2.0482 | |
| 116 | N | A | -2.4400 | |
| 117 | F | A | 0.0000 | |
| 118 | R | A | -2.4098 | |
| 119 | Y | A | -1.1755 | |
| 120 | W | A | -0.3728 | |
| 121 | G | A | -0.4869 | |
| 122 | Q | A | -1.2831 | |
| 123 | G | A | -1.0348 | |
| 124 | T | A | -1.6087 | |
| 125 | R | A | -2.3411 | |
| 126 | V | A | 0.0000 | |
| 127 | T | A | -1.8746 | |
| 128 | V | A | 0.0000 | |
| 129 | S | A | -2.2970 | |
| 130 | R | A | -2.5339 |