| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKFGDTENPTEPQHCGPDDRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPDGHPLPAAPPPSKLYVPPPPSSPFATPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9461 | |
| 2 | L | A | 1.9692 | |
| 3 | P | A | 0.6586 | |
| 4 | P | A | 0.3634 | |
| 5 | T | A | 0.1210 | |
| 6 | T | A | 0.1321 | |
| 7 | P | A | 0.1836 | |
| 8 | V | A | 1.2196 | |
| 9 | A | A | 0.0240 | |
| 10 | K | A | -1.1700 | |
| 11 | V | A | -0.4267 | |
| 12 | Q | A | -1.5370 | |
| 13 | S | A | -1.5997 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3953 | |
| 16 | E | A | -2.4267 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4654 | |
| 20 | P | A | 0.1146 | |
| 21 | T | A | 0.1169 | |
| 22 | S | A | -0.1694 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1013 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1548 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7003 | |
| 31 | R | A | -2.5842 | |
| 32 | L | A | -0.7343 | |
| 33 | L | A | 1.2266 | |
| 34 | T | A | 1.4421 | |
| 35 | V | A | 1.9525 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2641 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.2222 | |
| 40 | A | A | 0.0790 | |
| 41 | D | A | -0.1096 | |
| 42 | I | A | 1.4801 | |
| 43 | V | A | 1.2147 | |
| 44 | K | A | -1.3750 | |
| 45 | D | A | -2.4374 | |
| 46 | G | A | -1.4466 | |
| 47 | K | A | -1.0741 | |
| 48 | V | A | 1.6303 | |
| 49 | V | A | 2.0330 | |
| 50 | V | A | 1.5712 | |
| 51 | P | A | 0.8291 | |
| 52 | K | A | -0.0055 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1641 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4734 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2905 | |
| 70 | K | A | -1.8051 | |
| 71 | F | A | -0.6600 | |
| 72 | A | A | -0.5763 | |
| 73 | L | A | -0.8687 | |
| 74 | P | A | -1.2631 | |
| 75 | Q | A | -2.4787 | |
| 76 | K | A | -3.0929 | |
| 77 | D | A | -2.9854 | |
| 78 | F | A | -1.6416 | |
| 79 | Y | A | -1.9181 | |
| 80 | D | A | -2.7442 | |
| 81 | P | A | -2.3487 | |
| 82 | E | A | -3.0711 | |
| 83 | K | A | -3.4384 | |
| 84 | E | A | -2.4979 | |
| 85 | R | A | -1.3100 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6410 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9686 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3061 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6715 | |
| 99 | G | A | -0.5418 | |
| 100 | P | A | -0.4349 | |
| 101 | L | A | -0.0136 | |
| 102 | G | A | -0.2693 | |
| 103 | K | A | -0.7637 | |
| 104 | G | A | -0.6076 | |
| 105 | S | A | -0.6267 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1454 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1764 | |
| 110 | L | A | -0.1527 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2963 | |
| 113 | K | A | -0.4361 | |
| 114 | F | A | -0.8632 | |
| 115 | G | A | -1.1329 | |
| 116 | D | A | -1.3408 | |
| 117 | T | A | -0.8693 | |
| 118 | E | A | -1.8876 | |
| 119 | N | A | -2.2197 | |
| 120 | P | A | -2.0723 | |
| 121 | T | A | -1.8325 | |
| 122 | E | A | -2.5636 | |
| 123 | P | A | -1.7192 | |
| 124 | Q | A | -2.1167 | |
| 125 | H | A | -1.6712 | |
| 126 | C | A | -1.1104 | |
| 127 | G | A | -1.4355 | |
| 128 | P | A | -1.5164 | |
| 129 | D | A | -2.2854 | |
| 130 | D | A | -1.8486 | |
| 131 | R | A | -1.5115 | |
| 132 | V | A | -0.5108 | |
| 133 | N | A | -0.9106 | |
| 134 | F | A | -0.4001 | |
| 135 | S | A | -0.4111 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8023 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2386 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5739 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2467 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1421 | |
| 157 | D | A | 0.3157 | |
| 158 | L | A | 0.7924 | |
| 159 | A | A | 0.1562 | |
| 160 | E | A | -1.4468 | |
| 161 | P | A | -0.1975 | |
| 162 | C | A | 0.1959 | |
| 163 | P | A | -0.1579 | |
| 164 | G | A | -0.0589 | |
| 165 | L | A | 0.6184 | |
| 166 | P | A | -0.0996 | |
| 167 | P | A | -0.3330 | |
| 168 | G | A | -0.4140 | |
| 169 | A | A | -0.0143 | |
| 170 | C | A | 0.6682 | |
| 171 | P | A | 0.5309 | |
| 172 | P | A | 0.7740 | |
| 173 | I | A | 1.9699 | |
| 174 | Q | A | 0.8278 | |
| 175 | L | A | 1.4776 | |
| 176 | V | A | 0.8311 | |
| 177 | N | A | -0.3662 | |
| 178 | S | A | -0.0092 | |
| 179 | V | A | 0.3580 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3573 | |
| 182 | D | A | 0.0631 | |
| 183 | G | A | -0.1593 | |
| 184 | D | A | -0.5642 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1323 | |
| 190 | F | A | 0.0576 | |
| 191 | G | A | -0.1066 | |
| 192 | N | A | -0.2654 | |
| 193 | M | A | -0.1346 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4097 | |
| 197 | E | A | -2.6000 | |
| 198 | L | A | -1.2280 | |
| 199 | Q | A | -2.5509 | |
| 200 | Q | A | -3.3438 | |
| 201 | D | A | -3.6090 | |
| 202 | R | A | -3.3511 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4548 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3996 | |
| 211 | S | A | -1.7336 | |
| 212 | T | A | -1.4711 | |
| 213 | R | A | -2.1300 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1664 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2821 | |
| 220 | L | A | 0.4568 | |
| 221 | K | A | -1.4041 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9146 | |
| 224 | N | A | -1.6020 | |
| 225 | E | A | -1.3330 | |
| 226 | A | A | -0.6670 | |
| 227 | Y | A | -0.4011 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7155 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0845 | |
| 234 | F | A | 0.2696 | |
| 235 | G | A | -0.8465 | |
| 236 | R | A | -2.6749 | |
| 237 | R | A | -3.0412 | |
| 238 | E | A | -2.2125 | |
| 239 | Q | A | -0.2245 | |
| 240 | V | A | 1.5083 | |
| 241 | Y | A | 1.2381 | |
| 242 | A | A | 0.2000 | |
| 243 | R | A | -1.2060 | |
| 244 | H | A | -0.9798 | |
| 245 | F | A | 0.0966 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7076 | |
| 249 | C | A | -0.9700 | |
| 250 | G | A | -1.0027 | |
| 251 | P | A | -0.9856 | |
| 252 | D | A | -1.4360 | |
| 253 | G | A | -1.3200 | |
| 254 | H | A | -1.4670 | |
| 255 | P | A | -0.9774 | |
| 256 | L | A | 0.3052 | |
| 257 | P | A | -0.0919 | |
| 258 | A | A | 0.1607 | |
| 259 | A | A | -0.0072 | |
| 260 | P | A | -0.4555 | |
| 261 | P | A | -0.2751 | |
| 262 | P | A | -0.3574 | |
| 263 | S | A | -0.0497 | |
| 264 | K | A | -0.7456 | |
| 265 | L | A | 1.2344 | |
| 266 | Y | A | 1.4735 | |
| 267 | V | A | 1.7468 | |
| 268 | P | A | 0.9310 | |
| 269 | P | A | 0.3964 | |
| 270 | P | A | -0.1337 | |
| 271 | P | A | -0.3482 | |
| 272 | S | A | -0.2793 | |
| 273 | S | A | 0.0341 | |
| 274 | P | A | -0.2742 | |
| 275 | F | A | 0.7224 | |
| 276 | A | A | 0.2915 | |
| 277 | T | A | 0.1170 | |
| 278 | P | A | 0.1261 | |
| 279 | P | A | -0.5968 | |
| 280 | P | A | -0.7191 | |
| 281 | T | A | -0.5485 | |
| 282 | D | A | -1.1279 | |
| 283 | Y | A | 0.7867 | |
| 284 | F | A | 0.6768 | |
| 285 | G | A | 0.2537 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9099 | |
| 291 | L | A | 1.6177 | |
| 292 | V | A | 0.6258 | |
| 293 | S | A | -0.1546 | |
| 294 | S | A | -0.9716 | |
| 295 | D | A | -1.8403 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1568 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6297 | |
| 301 | R | A | -1.9043 | |
| 302 | P | A | -0.9741 | |
| 303 | F | A | -0.1594 | |
| 304 | W | A | -0.5156 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0807 | |
| 307 | R | A | -2.8276 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2483 | |
| 310 | G | A | -1.2167 | |
| 311 | N | A | -1.3006 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9568 | |
| 319 | N | A | -0.9065 | |
| 320 | E | A | -1.0689 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3685 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2047 | |
| 333 | N | A | 0.3740 | |
| 334 | F | A | 1.4643 | |
| 335 | T | A | 0.7396 | |
| 336 | I | A | 0.3889 | |
| 337 | S | A | -0.8806 | |
| 338 | Q | A | -1.5262 | |
| 339 | Q | A | -0.8815 | |
| 340 | L | A | 0.7888 | |
| 341 | C | A | 0.4384 | |
| 342 | T | A | 0.1547 | |
| 343 | P | A | -0.2753 | |
| 344 | A | A | 0.1832 | |
| 345 | P | A | 0.1452 | |
| 346 | N | A | -0.2861 | |
| 347 | V | A | 1.5553 | |
| 348 | Y | A | 1.4664 | |
| 349 | D | A | 0.0793 | |
| 350 | P | A | -0.3290 | |
| 351 | S | A | -0.2649 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5572 | |
| 354 | K | A | -1.6894 | |
| 355 | N | A | -1.7063 | |
| 356 | Y | A | -0.1011 | |
| 357 | L | A | 0.5669 | |
| 358 | R | A | 0.8974 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4402 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0014 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8811 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6601 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3037 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3243 | |
| 376 | L | A | -1.7582 | |
| 377 | D | A | -2.0402 | |
| 378 | P | A | -1.0670 | |
| 379 | G | A | -1.0224 | |
| 380 | V | A | -0.9328 | |
| 381 | L | A | -0.5390 | |
| 382 | A | A | -0.6602 | |
| 383 | H | A | -0.8474 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4019 | |
| 386 | T | A | -0.5776 | |
| 387 | M | A | -0.3326 | |
| 388 | N | A | -0.8700 | |
| 389 | P | A | -1.2842 | |
| 390 | T | A | -1.5995 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5774 | |
| 393 | E | A | -3.0060 | |
| 394 | N | A | -2.7952 | |
| 395 | W | A | -1.5970 | |
| 396 | N | A | -1.2780 | |
| 397 | L | A | -0.2823 | |
| 398 | G | A | 0.4897 | |
| 399 | F | A | 2.4081 | |
| 400 | V | A | 1.8335 | |
| 401 | P | A | 0.0478 | |
| 402 | P | A | -1.9933 | |
| 403 | K | A | -3.5120 | |
| 404 | E | A | -4.0323 | |
| 405 | R | A | -4.4983 | |
| 406 | E | A | -4.0366 | |
| 407 | D | A | -2.9845 | |
| 408 | P | A | -1.8225 | |
| 409 | Y | A | -0.9855 | |
| 410 | K | A | -2.0999 | |
| 411 | G | A | -0.6387 | |
| 412 | L | A | 0.6553 | |
| 413 | I | A | 1.5660 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4209 | |
| 416 | E | A | -1.7174 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8654 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8968 | |
| 421 | E | A | -2.5005 | |
| 422 | R | A | -1.9934 | |
| 423 | F | A | -1.0188 | |
| 424 | S | A | -1.3229 | |
| 425 | Q | A | -1.7931 | |
| 426 | D | A | -2.8997 | |
| 427 | L | A | -1.9911 | |
| 428 | D | A | -2.7800 | |
| 429 | Q | A | -2.6149 | |
| 430 | F | A | -1.4390 | |
| 431 | A | A | -0.8960 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5747 | |
| 435 | K | A | -0.7233 | |
| 436 | F | A | 0.1604 | |
| 437 | L | A | 1.0365 | |
| 438 | Y | A | 0.8283 | |
| 439 | Q | A | -0.2691 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine