| Chain sequence(s) |
A: DDCGKLFSGCDTNADCCEGYVCRLWCKLDW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:14)
[INFO] Main: Simulation completed successfully. (00:00:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.5519 | |
| 2 | D | A | -2.8113 | |
| 3 | C | A | -2.6434 | |
| 4 | G | A | -2.1644 | |
| 5 | K | A | -1.5295 | |
| 6 | L | A | 0.9798 | |
| 7 | F | A | 1.8128 | |
| 8 | S | A | 0.1780 | |
| 9 | G | A | 0.1257 | |
| 10 | C | A | -0.4749 | |
| 11 | D | A | -2.5321 | |
| 12 | T | A | -1.9260 | |
| 13 | N | A | -2.1492 | |
| 14 | A | A | -2.5568 | |
| 15 | D | A | -2.6769 | |
| 16 | C | A | 0.0000 | |
| 17 | C | A | -1.7444 | |
| 18 | E | A | -1.9419 | |
| 19 | G | A | -1.0914 | |
| 20 | Y | A | 0.1732 | |
| 21 | V | A | 0.4541 | |
| 22 | C | A | 0.3444 | |
| 23 | R | A | -0.0377 | |
| 24 | L | A | 1.4406 | |
| 25 | W | A | 1.7653 | |
| 26 | C | A | 0.0000 | |
| 27 | K | A | 1.0994 | |
| 28 | L | A | 0.9220 | |
| 29 | D | A | -0.8167 | |
| 30 | W | A | 0.5542 |