Project name: query_structure

Status: done

Started: 2026-03-16 23:03:22
Settings
Chain sequence(s) A: DDCGKLFSGCDTNADCCEGYVCRLWCKLDW
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:14)
Show buried residues

Minimal score value
-2.8113
Maximal score value
1.8128
Average score
-0.66
Total score value
-19.799

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.5519
2 D A -2.8113
3 C A -2.6434
4 G A -2.1644
5 K A -1.5295
6 L A 0.9798
7 F A 1.8128
8 S A 0.1780
9 G A 0.1257
10 C A -0.4749
11 D A -2.5321
12 T A -1.9260
13 N A -2.1492
14 A A -2.5568
15 D A -2.6769
16 C A 0.0000
17 C A -1.7444
18 E A -1.9419
19 G A -1.0914
20 Y A 0.1732
21 V A 0.4541
22 C A 0.3444
23 R A -0.0377
24 L A 1.4406
25 W A 1.7653
26 C A 0.0000
27 K A 1.0994
28 L A 0.9220
29 D A -0.8167
30 W A 0.5542
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Laboratory of Theory of Biopolymers 2018