| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFIFSSYSMGWFRQAPGKGLEGVSYISITGSTTTYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCAVLSAPGTPPWLQNYGGDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:43)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0309 | |
| 2 | V | A | -1.0622 | |
| 3 | Q | A | -1.3634 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.4271 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.1989 | |
| 8 | G | A | -0.6052 | |
| 9 | G | A | 0.2658 | |
| 10 | G | A | 0.7093 | |
| 11 | L | A | 1.3088 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.4972 | |
| 14 | P | A | -1.8961 | |
| 15 | G | A | -1.5623 | |
| 16 | G | A | -1.0886 | |
| 17 | S | A | -1.2733 | |
| 18 | L | A | -1.0901 | |
| 19 | R | A | -2.2397 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4900 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.4101 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.6899 | |
| 26 | G | A | -0.7485 | |
| 27 | F | A | 0.6590 | |
| 28 | I | A | 1.9151 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | 0.1701 | |
| 31 | S | A | 0.7224 | |
| 32 | Y | A | 0.8748 | |
| 33 | S | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.9285 | |
| 40 | A | A | -1.2436 | |
| 41 | P | A | -1.3407 | |
| 42 | G | A | -1.5799 | |
| 43 | K | A | -2.3564 | |
| 44 | G | A | -1.5098 | |
| 45 | L | A | -0.5606 | |
| 46 | E | A | -0.4528 | |
| 47 | G | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | Y | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | I | A | 0.2277 | |
| 54 | T | A | -0.1898 | |
| 55 | G | A | -0.3835 | |
| 56 | S | A | -0.3107 | |
| 57 | T | A | -0.2571 | |
| 58 | T | A | -0.1697 | |
| 59 | T | A | -0.4013 | |
| 60 | Y | A | -0.8973 | |
| 61 | A | A | -1.2893 | |
| 62 | D | A | -2.4643 | |
| 63 | S | A | -1.7570 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.5805 | |
| 66 | G | A | -1.7597 | |
| 67 | R | A | -1.5247 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -1.0044 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5632 | |
| 72 | R | A | -0.9138 | |
| 73 | D | A | -1.5383 | |
| 74 | N | A | -1.3605 | |
| 75 | A | A | -1.4396 | |
| 76 | K | A | -2.3556 | |
| 77 | N | A | -1.5505 | |
| 78 | T | A | -1.0786 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.6198 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.5831 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.5942 | |
| 85 | S | A | -1.4177 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.7814 | |
| 88 | A | A | -1.9829 | |
| 89 | E | A | -2.4316 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.5598 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.7378 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.3399 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | S | A | -0.3673 | |
| 101 | A | A | -0.1767 | |
| 102 | P | A | -0.2654 | |
| 103 | G | A | -0.3547 | |
| 104 | T | A | -0.2172 | |
| 105 | P | A | -0.3854 | |
| 106 | P | A | -0.8310 | |
| 107 | W | A | 0.0000 | |
| 108 | L | A | -0.2785 | |
| 109 | Q | A | -1.5113 | |
| 110 | N | A | -1.7028 | |
| 111 | Y | A | -0.7495 | |
| 112 | G | A | -1.0433 | |
| 113 | G | A | -0.5768 | |
| 114 | D | A | -0.8217 | |
| 115 | Y | A | -0.0592 | |
| 116 | W | A | 0.1715 | |
| 117 | G | A | -0.1890 | |
| 118 | Q | A | -0.8117 | |
| 119 | G | A | 0.0000 | |
| 120 | T | A | 0.6022 | |
| 121 | L | A | 1.6010 | |
| 122 | V | A | 0.0000 | |
| 123 | T | A | 0.2501 | |
| 124 | V | A | 0.0000 | |
| 125 | S | A | -0.9519 |