| Chain sequence(s) |
A: LPAPKNLVVSEVTEDSLRLSWTYDRDGYDSFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAEFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.6091 | |
| 2 | P | A | -0.1567 | |
| 3 | A | A | -0.1380 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.2658 | |
| 6 | N | A | -1.3256 | |
| 7 | L | A | -0.1320 | |
| 8 | V | A | 0.8983 | |
| 9 | V | A | 0.0923 | |
| 10 | S | A | -0.6413 | |
| 11 | E | A | -1.7926 | |
| 12 | V | A | -0.9163 | |
| 13 | T | A | -1.7435 | |
| 14 | E | A | -2.8344 | |
| 15 | D | A | -2.8200 | |
| 16 | S | A | -2.1271 | |
| 17 | L | A | 0.0000 | |
| 18 | R | A | -1.4243 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.4845 | |
| 21 | W | A | 0.0000 | |
| 22 | T | A | -1.6381 | |
| 23 | Y | A | -2.4718 | |
| 24 | D | A | -3.3422 | |
| 25 | R | A | -3.5317 | |
| 26 | D | A | -3.4420 | |
| 27 | G | A | -2.5046 | |
| 28 | Y | A | 0.0000 | |
| 29 | D | A | -2.7556 | |
| 30 | S | A | -1.8265 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | -0.3760 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | -0.5230 | |
| 35 | Y | A | -0.6477 | |
| 36 | Q | A | -1.5542 | |
| 37 | E | A | -2.2395 | |
| 38 | S | A | -2.1502 | |
| 39 | E | A | -2.6155 | |
| 40 | K | A | -1.9945 | |
| 41 | V | A | -0.0307 | |
| 42 | G | A | -0.9491 | |
| 43 | E | A | -2.1034 | |
| 44 | A | A | -0.9846 | |
| 45 | I | A | -0.4368 | |
| 46 | N | A | -1.0167 | |
| 47 | L | A | -0.1237 | |
| 48 | T | A | -0.1903 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.1805 | |
| 51 | G | A | -1.7679 | |
| 52 | S | A | -1.5636 | |
| 53 | E | A | -1.4399 | |
| 54 | R | A | -1.1281 | |
| 55 | S | A | -0.8002 | |
| 56 | Y | A | -0.8704 | |
| 57 | D | A | -1.7995 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.4389 | |
| 60 | G | A | -1.5254 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -3.0058 | |
| 63 | P | A | -2.5356 | |
| 64 | G | A | -1.8459 | |
| 65 | T | A | -2.2364 | |
| 66 | E | A | -2.7451 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | -1.4767 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | 0.0000 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.1813 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | H | A | -1.7684 | |
| 76 | N | A | -2.4681 | |
| 77 | V | A | -0.6214 | |
| 78 | Y | A | -0.1356 | |
| 79 | K | A | -2.1839 | |
| 80 | D | A | -2.6729 | |
| 81 | T | A | -1.8982 | |
| 82 | N | A | -2.5342 | |
| 83 | M | A | -1.1622 | |
| 84 | R | A | -1.5376 | |
| 85 | G | A | 0.1591 | |
| 86 | L | A | 1.3100 | |
| 87 | P | A | 0.3944 | |
| 88 | L | A | 0.0274 | |
| 89 | S | A | -0.4020 | |
| 90 | A | A | -0.6814 | |
| 91 | E | A | -2.1569 | |
| 92 | F | A | 0.0000 | |
| 93 | T | A | -1.6333 | |
| 94 | T | A | -1.8993 |